Non-Coding RNA Search

Ova2-C0003275_H19

Sequence:


               
               TGCCCCAAGGCCTACAGCGCATCTTTTGCCTCAAGCTGGAGGACTTGGTGCCCCCTCCAC
CTATCGTGGACAAGATCTTTATGGACACCTTGTCTTTCTGACCCTGCCCCGAACACGCGT
GCACACTCACGTGCATGTTCTTCTTGTCACCCACGTGCCTTTAAGCCCATAGCCCACGGA
CCCCCAGACCACCCCACCCCCCAGCCTGTTTTTTGAGCTAAGACTGATGTATCTCCTCAT
TCCAGAAGATGGACAGAGAGAGAGAGAGAGCTCAAGACCTGGGGGGGAGGGTGTGTATTC
ACGGGGGTGACCCCACTATTTCTCTTATCCCTCCCAGCTCAGACCTGGCCTTCCGCGTGT
TTTTGTAAGATAAACCATTTTTAACACATACCACTCTGCTGTATATAAGCTGACGCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCCCCAAGGCCTACAGCGCATCTTTTGCCTCAAGCTGGAGGACTTGGTGCCCCCTCCAC
CTATCGTGGACAAGATCTTTATGGACACCTTGTCTTTCTGACCCTGCCCCGAACACGCGT
GCACACTCACGTGCATGTTCTTCTTGTCACCCACGTGCCTTTAAGCCCATAGCCCACGGA
CCCCCAGACCACCCCACCCCCCAGCCTGTTTTTTGAGCTAAGACTGATGTATCTCCTCAT
TCCAGAAGATGGACAGAGAGAGAGAGAGAGCTCAAGACCTGGGGGGGAGGGTGTGTATTC
ACGGGGGTGACCCCACTATTTCTCTTATCCCTCCCAGCTCAGACCTGGCCTTCCGCGTGT
TTTTGTAAGATAAACCATTTTTAACACATACCACTCTGCTGTATATAAGCTGACGCTGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55818267|gb|AAV65980.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55818267|gb|AAV65980.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               238-391, + strand, RNAz p=0.633007

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               238-391, + strand, RNAz p=0.633007

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_002135, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_002135, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-419, gnl|bosTau2|chr5 (19501206-19501614)
               

               
               4-419, gnl|Hg17|chr12 (50738898-50739291)
               

               
               4-419, gnl|Mm7|chr15 (101259999-101260396)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-419, gnl|bosTau2|chr5 (19501206-19501614)
               

               
               4-419, gnl|Hg17|chr12 (50738898-50739291)
               

               
               4-419, gnl|Mm7|chr15 (101259999-101260396)

	4-419, gnl\|bosTau2\|chr5 (19501206-19501614)
	4-419, gnl\|Hg17\|chr12 (50738898-50739291)
	4-419, gnl\|Mm7\|chr15 (101259999-101260396)