Ova2-C0003276_A16
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGGAAAGGGTCAGGAATCTTCACATCCGAAGAGAATAAACAATGAGGATAATTCACAG TTCAAAGATCATCCAACATTAAATGAAAGATATTTATTACTCCATCTGCTTGGAAGAGGT GGCTTTAGTGAGGTGTATAAGGCTTTTGACTTGTATGAGCAAAGATATGCTGCTGTGAAG ATCCACCAGCTTAATAAAAGCTGGAGAGATGATAAAAAAGAAAACTACCATAAACACGCT TGCAGAGAGTATCGAATACACAAAGAGCTGGACCACCCCAGAATAGTTAAACTCTATGAT TACTTCTCCTTGGACACAGATACGTTTTGTACAGTGCTAGAGTACTGTGAACGCAATGAC TTGAACTTCTACCTGACACAACACAAGTTGATGTCTGAAAAAGAAGCACGGATCCATTGT GATGCACATTGTGAATGCCTTACGATATCTTAATGAAATCAAACCTCCTATTATACATTA TGACCTTAAACCAGGAAATATCCTTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGGAAAGGGTCAGGAATCTTCACATCCGAAGAGAATAAACAATGAGGATAATTCACAG TTCAAAGATCATCCAACATTAAATGAAAGATATTTATTACTCCATCTGCTTGGAAGAGGT GGCTTTAGTGAGGTGTATAAGGCTTTTGACTTGTATGAGCAAAGATATGCTGCTGTGAAG ATCCACCAGCTTAATAAAAGCTGGAGAGATGATAAAAAAGAAAACTACCATAAACACGCT TGCAGAGAGTATCGAATACACAAAGAGCTGGACCACCCCAGAATAGTTAAACTCTATGAT TACTTCTCCTTGGACACAGATACGTTTTGTACAGTGCTAGAGTACTGTGAACGCAATGAC TTGAACTTCTACCTGACACAACACAAGTTGATGTCTGAAAAAGAAGCACGGATCCATTGT GATGCACATTGTGAATGCCTTACGATATCTTAATGAAATCAAACCTCCTATTATACATTA TGACCTTAAACCAGGAAATATCCTTCT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 321-439, + strand, RNAz p=0.693316 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 321-439, + strand, RNAz p=0.693316 |
| Aligned organism(s): 34 entry(ies) | More info |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
| 321-500, gnl|bosTau2|chr2 (16266530-16266708) | |
| 321-500, gnl|canFam2|chr36 (18558533-18558723) | |
| 321-500, gnl|canFam2|chr36 (18558721-18558556) | |
| 321-500, gnl|danRer3|chr14 (42646038-42646225) | |
| 321-500, gnl|danRer3|chr17 (40141503-40141667) | |
| 321-500, gnl|dasNov1|scaffold_65498 (607-765) | |
| 321-500, gnl|dasNov1|scaffold_65498 (763-607) | |
| 321-500, gnl|echTel1|scaffold_262655 (3963-3818) | |
| 321-500, gnl|echTel1|scaffold_320886 (52245-52055) | |
| 321-500, gnl|fr1|chrUn (7258839-7259029) | |
| 321-500, gnl|fr1|chrUn (7259027-7258863) | |
| 321-500, gnl|galGal2|chr7 (18935364-18935162) | |
| 321-500, gnl|galGal2|chr7 (18935164-18935329) | |
| 321-500, gnl|hg17|chr2 (171688472-171688661) | |
| 321-500, gnl|Hg17|chr2 (171688663-171688486) | |
| 321-500, gnl|hg17|chr9 (122529538-122529701) | |
| 321-500, gnl|loxAfr1|scaffold_22397 (911-1101) | |
| 321-500, gnl|loxAfr1|scaffold_22397 (1099-934) | |
| 321-500, gnl|mm7|chr2 (70560248-70560438) | |
| 321-500, gnl|mm7|chr2 (70560436-70560271) | |
| 321-500, gnl|Mm7|chr2 (70560440-70560262) | |
| 321-500, gnl|monDom2|scaffold_2 (69710553-69710742) | |
| 321-500, gnl|monDom2|scaffold_2 (69710740-69710575) | |
| 321-500, gnl|oryCun1|scaffold_180641 (34757-34572) | |
| 321-500, gnl|oryCun1|scaffold_180641 (34574-34739) | |
| 321-500, gnl|panTro1|chr11 (107240587-107240751) | |
| 321-500, gnl|panTro1|chr13 (61311699-61311888) | |
| 321-500, gnl|rheMac2|chr12 (34685773-34685962) | |
| 321-500, gnl|rheMac2|chr15 (13110189-13110025) | |
| 321-500, gnl|rn3|chr3 (52846433-52846607) | |
| 321-500, gnl|rn3|chr3 (52846605-52846440) | |
| 321-500, gnl|tetNig1|chr2 (11485597-11485408) | |
| 321-500, gnl|tetNig1|chr2 (11485410-11485574) | |
| 321-500, gnl|xenTro1|scaffold_65 (2196745-2196550) |
| Aligned organism(s): 34 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 321-500, gnl|bosTau2|chr2 (16266530-16266708) | |
| 321-500, gnl|canFam2|chr36 (18558533-18558723) | |
| 321-500, gnl|canFam2|chr36 (18558721-18558556) | |
| 321-500, gnl|danRer3|chr14 (42646038-42646225) | |
| 321-500, gnl|danRer3|chr17 (40141503-40141667) | |
| 321-500, gnl|dasNov1|scaffold_65498 (607-765) | |
| 321-500, gnl|dasNov1|scaffold_65498 (763-607) | |
| 321-500, gnl|echTel1|scaffold_262655 (3963-3818) | |
| 321-500, gnl|echTel1|scaffold_320886 (52245-52055) | |
| 321-500, gnl|fr1|chrUn (7258839-7259029) | |
| 321-500, gnl|fr1|chrUn (7259027-7258863) | |
| 321-500, gnl|galGal2|chr7 (18935364-18935162) | |
| 321-500, gnl|galGal2|chr7 (18935164-18935329) | |
| 321-500, gnl|hg17|chr2 (171688472-171688661) | |
| 321-500, gnl|Hg17|chr2 (171688663-171688486) | |
| 321-500, gnl|hg17|chr9 (122529538-122529701) | |
| 321-500, gnl|loxAfr1|scaffold_22397 (911-1101) | |
| 321-500, gnl|loxAfr1|scaffold_22397 (1099-934) | |
| 321-500, gnl|mm7|chr2 (70560248-70560438) | |
| 321-500, gnl|mm7|chr2 (70560436-70560271) | |
| 321-500, gnl|Mm7|chr2 (70560440-70560262) | |
| 321-500, gnl|monDom2|scaffold_2 (69710553-69710742) | |
| 321-500, gnl|monDom2|scaffold_2 (69710740-69710575) | |
| 321-500, gnl|oryCun1|scaffold_180641 (34757-34572) | |
| 321-500, gnl|oryCun1|scaffold_180641 (34574-34739) | |
| 321-500, gnl|panTro1|chr11 (107240587-107240751) | |
| 321-500, gnl|panTro1|chr13 (61311699-61311888) | |
| 321-500, gnl|rheMac2|chr12 (34685773-34685962) | |
| 321-500, gnl|rheMac2|chr15 (13110189-13110025) | |
| 321-500, gnl|rn3|chr3 (52846433-52846607) | |
| 321-500, gnl|rn3|chr3 (52846605-52846440) | |
| 321-500, gnl|tetNig1|chr2 (11485597-11485408) | |
| 321-500, gnl|tetNig1|chr2 (11485410-11485574) | |
| 321-500, gnl|xenTro1|scaffold_65 (2196745-2196550) |