Non-Coding RNA Search

Ova2-C0003276_A18

Sequence:


               
               GTCCCTTTTGTCTTCTGGCCAGTCCCCTCTGACCTCTGCTTTCCCGCAGGCTCACAGCGC
TTCCCACTCTACCCCCAACTCTGGGTAGCCCAGCAGGCTGCCGGTCCTGCCCTGTGTGTT
GCTCTCCCTCCATCTTGGCTTCAGCCCTGTCGTTCTCGGTGGGGTCACCCCATTTAACCT
CTGTTTTCCCTTTTGTCAGTGGCTGCTCCCCGAGACGCAGAGATCCACAAGGACGTTCAG
AACTACTATGGGAATGTACTGAAGACATCTGCAGACCTCCAGACTAATGCTTGTGTCACC
CCAGCCAAGGGGGTCCCTGAGTACATCCGGAAAAGTCTGCAGAATGTACATGAAGAAGTT
ATTTCCAGGTATTATGGCTGCGGTCTGGTGGTGCCTGAGCATCTGGAAAACTGCCGGATT
TTGGATCTGGGCAGTGGGAGTGGCAGAGATTGCTATGTGCTTAGCCAGCTGGTCGGCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCCCTTTTGTCTTCTGGCCAGTCCCCTCTGACCTCTGCTTTCCCGCAGGCTCACAGCGC
TTCCCACTCTACCCCCAACTCTGGGTAGCCCAGCAGGCTGCCGGTCCTGCCCTGTGTGTT
GCTCTCCCTCCATCTTGGCTTCAGCCCTGTCGTTCTCGGTGGGGTCACCCCATTTAACCT
CTGTTTTCCCTTTTGTCAGTGGCTGCTCCCCGAGACGCAGAGATCCACAAGGACGTTCAG
AACTACTATGGGAATGTACTGAAGACATCTGCAGACCTCCAGACTAATGCTTGTGTCACC
CCAGCCAAGGGGGTCCCTGAGTACATCCGGAAAAGTCTGCAGAATGTACATGAAGAAGTT
ATTTCCAGGTATTATGGCTGCGGTCTGGTGGTGCCTGAGCATCTGGAAAACTGCCGGATT
TTGGATCTGGGCAGTGGGAGTGGCAGAGATTGCTATGTGCTTAGCCAGCTGGTCGGCCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61840421|ref|XP_591590.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61840421|ref|XP_591590.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               237-355, - strand, RNAz p=0.723251

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-355, - strand, RNAz p=0.723251

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               237-359, gnl|bosTau2|chr26 (15429349-15429471)
               

               
               237-359, gnl|Hg17|chr10 (104619827-104619949)
               

               
               237-359, gnl|Mm7|chr19 (46604996-46605118)
               


               
               362-476, gnl|bosTau2|chr26 (15430408-15430522)
               

               
               362-476, gnl|Hg17|chr10 (104622188-104622302)
               

               
               362-476, gnl|Mm7|chr19 (46605891-46606005)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               237-359, gnl|bosTau2|chr26 (15429349-15429471)
               

               
               237-359, gnl|Hg17|chr10 (104619827-104619949)
               

               
               237-359, gnl|Mm7|chr19 (46604996-46605118)
               


               
               362-476, gnl|bosTau2|chr26 (15430408-15430522)
               

               
               362-476, gnl|Hg17|chr10 (104622188-104622302)
               

               
               362-476, gnl|Mm7|chr19 (46605891-46606005)

	237-359, gnl\|bosTau2\|chr26 (15429349-15429471)
	237-359, gnl\|Hg17\|chr10 (104619827-104619949)
	237-359, gnl\|Mm7\|chr19 (46604996-46605118)

	362-476, gnl\|bosTau2\|chr26 (15430408-15430522)
	362-476, gnl\|Hg17\|chr10 (104622188-104622302)
	362-476, gnl\|Mm7\|chr19 (46605891-46606005)