Non-Coding RNA Search

Ova2-C0003276_M12

Sequence:


               
               GTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACTGGCTGGTGGGAGC
GGCCTGTCAGCCAGCTTAGCCGTGGCAGTAGCCCTCGAAGTCAGGCTTCAGCTGTTGCCC
CAGGGCTCCCTCCACTGCACCCCCTTACCAAGGCCTATGCAGTAGTGGGTGGGCCACCTG
GAGGGCCACCTGTCCGGGAGCTGGCTGCTGTTCCTCCAGAACTTACAGGTAGCCGCCAGT
CCTTCCAAAAGGCCATGGGAAACCCCTGTGAGTTCTTTGTGGACATCATGTGATGATCAA
CCAGTGTCTTCAGTGCTGCCTGTGGCGAGAGTCTGTGTTCCTGCTGTGCCAGGAGCTCTA
TGGGCTTGCCTTAGTGGTGGCCGGCCAGGATAGGTCAGTCGTAGGGTCTGGGCCAGGGCA
GAGGGAGCAGGCAACAGAAGAAGGGCTGAGGGCAGCCATACGACCAAGATATCAGCTTGA
TATTTTGTCTGCTCTTGGGGCTGCTGGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGCAGTGAATCAGACCACACAGTACCAAGTGGGTCTGGTAGCACTGGCTGGTGGGAGC
GGCCTGTCAGCCAGCTTAGCCGTGGCAGTAGCCCTCGAAGTCAGGCTTCAGCTGTTGCCC
CAGGGCTCCCTCCACTGCACCCCCTTACCAAGGCCTATGCAGTAGTGGGTGGGCCACCTG
GAGGGCCACCTGTCCGGGAGCTGGCTGCTGTTCCTCCAGAACTTACAGGTAGCCGCCAGT
CCTTCCAAAAGGCCATGGGAAACCCCTGTGAGTTCTTTGTGGACATCATGTGATGATCAA
CCAGTGTCTTCAGTGCTGCCTGTGGCGAGAGTCTGTGTTCCTGCTGTGCCAGGAGCTCTA
TGGGCTTGCCTTAGTGGTGGCCGGCCAGGATAGGTCAGTCGTAGGGTCTGGGCCAGGGCA
GAGGGAGCAGGCAACAGAAGAAGGGCTGAGGGCAGCCATACGACCAAGATATCAGCTTGA
TATTTTGTCTGCTCTTGGGGCTGCTGGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               80-199, - strand, RNAz p=0.621258

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-199, - strand, RNAz p=0.621258

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-362, gnl|bosTau2|chr16 (37909255-37909620)
               

               
               1-362, gnl|Hg17|chr1 (1311734-1311385)
               

               
               1-362, gnl|Mm7|chr4 (154847616-154847960)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-362, gnl|bosTau2|chr16 (37909255-37909620)
               

               
               1-362, gnl|Hg17|chr1 (1311734-1311385)
               

               
               1-362, gnl|Mm7|chr4 (154847616-154847960)

	1-362, gnl\|bosTau2\|chr16 (37909255-37909620)
	1-362, gnl\|Hg17\|chr1 (1311734-1311385)
	1-362, gnl\|Mm7\|chr4 (154847616-154847960)