Non-Coding RNA Search

Ova2-C0003276_M15

Sequence:


               
               CAGCTGGAGACCAAGCAGTCAGCAGAAGCCTGTGGTGGATAATTCACACTGCAAACCTTA
GCTTTAGGGTTTCGTGCCCTGGAGCAGTGCTTTTTGGGGTGCTAGTATTGAGGCAGCCTG
GAATAAAATGGCCGTATTGAGTTTATGGTAAGTCAAGTTCCAACACTCACTGGACTCTCT
CTCTTCCGCCTGCAGTGCTGGAGAGCTGGCTGGACTACACTGGGGAACTGGAGCCCCCAG
AGCCACTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACTGACCTGG
GCAAGGTGCAGCAGATTGCCCTCTGCTGCTCAACATGAAGCTGGGCACCCAAGACATTGG
AGCACAATCCTGGCATGTCTGCCAGGGGGCTTCGCATATTTAAGTAAATAAACTAAGCAT
GCTGAATGCACGTGACACTGACTGACTTCAGGGATTTAGCCAGGAGTGTGATGGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCTGGAGACCAAGCAGTCAGCAGAAGCCTGTGGTGGATAATTCACACTGCAAACCTTA
GCTTTAGGGTTTCGTGCCCTGGAGCAGTGCTTTTTGGGGTGCTAGTATTGAGGCAGCCTG
GAATAAAATGGCCGTATTGAGTTTATGGTAAGTCAAGTTCCAACACTCACTGGACTCTCT
CTCTTCCGCCTGCAGTGCTGGAGAGCTGGCTGGACTACACTGGGGAACTGGAGCCCCCAG
AGCCACTGGCCAGGCTTCCACAGCTCAAGCATTGCATCAAGCAGCTGCTGACTGACCTGG
GCAAGGTGCAGCAGATTGCCCTCTGCTGCTCAACATGAAGCTGGGCACCCAAGACATTGG
AGCACAATCCTGGCATGTCTGCCAGGGGGCTTCGCATATTTAAGTAAATAAACTAAGCAT
GCTGAATGCACGTGACACTGACTGACTTCAGGGATTTAGCCAGGAGTGTGATGGAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               212-408, - strand, RNAz p=0.895424

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               212-408, - strand, RNAz p=0.895424

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               138-476, gnl|bosTau2|chr13 (46210547-46210203)
               

               
               138-476, gnl|Hg17|chr20 (33998758-33999105)
               

               
               138-476, gnl|Mm7|chr2 (156048090-156048434)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               138-476, gnl|bosTau2|chr13 (46210547-46210203)
               

               
               138-476, gnl|Hg17|chr20 (33998758-33999105)
               

               
               138-476, gnl|Mm7|chr2 (156048090-156048434)

	138-476, gnl\|bosTau2\|chr13 (46210547-46210203)
	138-476, gnl\|Hg17\|chr20 (33998758-33999105)
	138-476, gnl\|Mm7\|chr2 (156048090-156048434)