Ova2-C0003276_P20
|
GCGGCTCGAGCTTTTGCTATCAAGTCGTCCTCTACGTCCTGACTCACCTCCAGGCGGAAG
AACAGAAGGCACAGCCAGGGCTCCCACAGTGACGCAGCGCAGCCTCTGAAGGTTCCTCGC
CTCCAGCCGGGACGCCTCCAGCCGACGCCTGCTCTCCACTCCACGAGAGCAGCAAGGCCA
AGCCGCACCGCCATGTTTAGTCCCTCGAGCTTGAAGGACAAGCGCTCCCGTCAGATGCGA
ACGTCAAGATGCTGTGTTTTTACAGCCGCTTTGACCTCCAATGGTTATGAAAACTCCTTT
ATCATGGACCGGACAAAGCAGGTCTTAGGGCTGGAGACAGCATTTGATCATAGTGGATGT
TGTTACGAAGACACACTGAGTCTATTTTTAATGTACCAAATCCTGTTTATAGCAGAATTT
TTCCAGTATTTTAATAAAGTAGATTTATTTTATAGGGGGATACTTGAAGCCAGTATTTAA
GCTTTTAATGACAGTAATATTGGCAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGGCTCGAGCTTTTGCTATCAAGTCGTCCTCTACGTCCTGACTCACCTCCAGGCGGAAG
AACAGAAGGCACAGCCAGGGCTCCCACAGTGACGCAGCGCAGCCTCTGAAGGTTCCTCGC
CTCCAGCCGGGACGCCTCCAGCCGACGCCTGCTCTCCACTCCACGAGAGCAGCAAGGCCA
AGCCGCACCGCCATGTTTAGTCCCTCGAGCTTGAAGGACAAGCGCTCCCGTCAGATGCGA
ACGTCAAGATGCTGTGTTTTTACAGCCGCTTTGACCTCCAATGGTTATGAAAACTCCTTT
ATCATGGACCGGACAAAGCAGGTCTTAGGGCTGGAGACAGCATTTGATCATAGTGGATGT
TGTTACGAAGACACACTGAGTCTATTTTTAATGTACCAAATCCTGTTTATAGCAGAATTT
TTCCAGTATTTTAATAAAGTAGATTTATTTTATAGGGGGATACTTGAAGCCAGTATTTAA
GCTTTTAATGACAGTAATATTGGCAT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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250-506, gnl|bosTau2|chr6 (59735602-59735847) |
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250-506, gnl|canFam2|chr32 (13288660-13289222) |
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250-506, gnl|dasNov1|scaffold_12704 (37714-38325) |
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250-506, gnl|galGal2|chr4 (46394029-46393344) |
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250-506, gnl|hg17|chr4 (88092926-88093533) |
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250-506, gnl|Hg17|chr4 (88093046-88093304) |
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250-506, gnl|loxAfr1|scaffold_8050 (69155-69772) |
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250-506, gnl|mm7|chr5 (102787130-102787689) |
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250-506, gnl|Mm7|chr5 (102787243-102787497) |
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250-506, gnl|monDom2|scaffold_37 (16238129-16237482) |
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250-506, gnl|oryCun1|scaffold_100544 (1428-2010) |
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250-506, gnl|panTro1|chr3 (104078986-104079588) |
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250-506, gnl|rheMac2|chr5 (79771296-79771902) |
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250-506, gnl|rn3|chr14 (7298736-7298178) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
250-506, gnl|bosTau2|chr6 (59735602-59735847) |
|
250-506, gnl|canFam2|chr32 (13288660-13289222) |
|
250-506, gnl|dasNov1|scaffold_12704 (37714-38325) |
|
250-506, gnl|galGal2|chr4 (46394029-46393344) |
|
250-506, gnl|hg17|chr4 (88092926-88093533) |
|
250-506, gnl|Hg17|chr4 (88093046-88093304) |
|
250-506, gnl|loxAfr1|scaffold_8050 (69155-69772) |
|
250-506, gnl|mm7|chr5 (102787130-102787689) |
|
250-506, gnl|Mm7|chr5 (102787243-102787497) |
|
250-506, gnl|monDom2|scaffold_37 (16238129-16237482) |
|
250-506, gnl|oryCun1|scaffold_100544 (1428-2010) |
|
250-506, gnl|panTro1|chr3 (104078986-104079588) |
|
250-506, gnl|rheMac2|chr5 (79771296-79771902) |
|
250-506, gnl|rn3|chr14 (7298736-7298178) |
