Non-Coding RNA Search

Ova2-C0003277_K18

Sequence:


               
               CCCAAATGTGAGCGGGCCCAGTGACCTTCGGCACTTTGATCCCGAGTTTACTGAGGAGCC
GGTCCCCAGCTCCATCGGGCGATCCCCTGACAGCATCCTTGTCACAGCCAGTGTGAAAGA
AGCCGCGGAAGCCTTCCTTGGCTTCTCCTATGCCCCTCCTATGGACTCCTTCCTCTGAAA
GCTCCCAGGATGGTTCCGAAGGATTTCCTCAGCGTTTTTCTAAAGTGTTTTAGTTAGCCT
TTGGTGGAGTTACCAGCTGACAGAACATCTTAGAAGAGAAATTTGCACACCAGGAAGCTT
GGCAGTCCCGCCTGCCGGGCGCTGCACGCGGCTTGACGCGGAAGCTTTCCGGAAGCTTTC
CGAAGAGCACATCCTCCTCTCAGTGAGCTAGTGAGGTCTTCATTTCTTTTCTTCCTTCCA
ACGTGGTGCTAGCTCTAAAGGAGCTTGAGAGTGCCGCCTGAGACGCACATTGGTCTCAGT
G

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCAAATGTGAGCGGGCCCAGTGACCTTCGGCACTTTGATCCCGAGTTTACTGAGGAGCC
GGTCCCCAGCTCCATCGGGCGATCCCCTGACAGCATCCTTGTCACAGCCAGTGTGAAAGA
AGCCGCGGAAGCCTTCCTTGGCTTCTCCTATGCCCCTCCTATGGACTCCTTCCTCTGAAA
GCTCCCAGGATGGTTCCGAAGGATTTCCTCAGCGTTTTTCTAAAGTGTTTTAGTTAGCCT
TTGGTGGAGTTACCAGCTGACAGAACATCTTAGAAGAGAAATTTGCACACCAGGAAGCTT
GGCAGTCCCGCCTGCCGGGCGCTGCACGCGGCTTGACGCGGAAGCTTTCCGGAAGCTTTC
CGAAGAGCACATCCTCCTCTCAGTGAGCTAGTGAGGTCTTCATTTCTTTTCTTCCTTCCA
ACGTGGTGCTAGCTCTAAAGGAGCTTGAGAGTGCCGCCTGAGACGCACATTGGTCTCAGT
G

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|14133510|gb|AAK54044.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|14133510|gb|AAK54044.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               49-206, - strand, RNAz p=0.872172

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               49-206, - strand, RNAz p=0.872172

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               10-206, gnl|bosTau2|chr9 (40489126-40488929)
               

               
               10-206, gnl|Hg17|chr6 (134533267-134533069)
               

               
               10-206, gnl|Mm7|chr10 (21731500-21731717)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-206, gnl|bosTau2|chr9 (40489126-40488929)
               

               
               10-206, gnl|Hg17|chr6 (134533267-134533069)
               

               
               10-206, gnl|Mm7|chr10 (21731500-21731717)

	10-206, gnl\|bosTau2\|chr9 (40489126-40488929)
	10-206, gnl\|Hg17\|chr6 (134533267-134533069)
	10-206, gnl\|Mm7\|chr10 (21731500-21731717)