Non-Coding RNA Search

OvaF-UMC-pfeto1-016-e01

Sequence:


               
               TATATCATGTTCCCCTCCAGAGATAAGATTTATAACTCTCTGAATACCGCAAGTAGGATC
TTCTTTAAAAGAGTATGTGGATTCACACTTAGTATGCTCAGTGCTAAAGCCTATGAATGC
TGAAGATGAGTGGGTTAAAAGTGCCAAGCAAAGAAGTGATGTATCAATATATAATCCAAT
CATTTATGATGTCATCTCTGAATGCACGCAAATCTATTTTTTATTTAGCCCACTTAATGT
TCCTGAAAGATTTTCTTCCAGGTATTTTTCAAAAACTGAAAAAAAAAAAAAAAAAAAAAA
AAACACTGAAAAAATAAAATAATCACAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATATCATGTTCCCCTCCAGAGATAAGATTTATAACTCTCTGAATACCGCAAGTAGGATC
TTCTTTAAAAGAGTATGTGGATTCACACTTAGTATGCTCAGTGCTAAAGCCTATGAATGC
TGAAGATGAGTGGGTTAAAAGTGCCAAGCAAAGAAGTGATGTATCAATATATAATCCAAT
CATTTATGATGTCATCTCTGAATGCACGCAAATCTATTTTTTATTTAGCCCACTTAATGT
TCCTGAAAGATTTTCTTCCAGGTATTTTTCAAAAACTGAAAAAAAAAAAAAAAAAAAAAA
AAACACTGAAAAAATAAAATAATCACAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               69-183, + strand, RNAz p=0.963286

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               69-183, + strand, RNAz p=0.963286

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               30-299, gnl|bosTau2|chr24 (20666855-20667128)
               

               
               30-299, gnl|Hg17|chr18 (23699840-23700105)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               30-299, gnl|bosTau2|chr24 (20666855-20667128)
               

               
               30-299, gnl|Hg17|chr18 (23699840-23700105)

	30-299, gnl\|bosTau2\|chr24 (20666855-20667128)
	30-299, gnl\|Hg17\|chr18 (23699840-23700105)