OvaF-UMC-pfeto1-019-f01
|
TTAGACACGTCTCTCCTTCTCATCTTTTTTCTTTGCCTTTTCTAAATTGTTGTAAAATAA
CTGAATGGTCTTGTTTTCCTTTGTTTGGGTCAAGAAATTTTAGCTGAAAATTGTTACTGT
GTGAAAGAAGATTATTGACTCAACAAGCCTTCAATTTTCCGTGAATAACACTCCCACCCC
CTAGCTTCAGGAACACGCCGTGCATGCATTCTATTTTAAAATACAGACTGTAATTTAAAA
CAGGCAGTTTGATGCCCCACTGAACTTTGTTTAAGCCTGGAATAAAAGAGGGGGGGAAAA
AGCTTTAAGCCACAAAAAAGTGACTAAGCTTTCTCAACCGCTTTTCTTCATAATGCATTC
TATTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTAGACACGTCTCTCCTTCTCATCTTTTTTCTTTGCCTTTTCTAAATTGTTGTAAAATAA
CTGAATGGTCTTGTTTTCCTTTGTTTGGGTCAAGAAATTTTAGCTGAAAATTGTTACTGT
GTGAAAGAAGATTATTGACTCAACAAGCCTTCAATTTTCCGTGAATAACACTCCCACCCC
CTAGCTTCAGGAACACGCCGTGCATGCATTCTATTTTAAAATACAGACTGTAATTTAAAA
CAGGCAGTTTGATGCCCCACTGAACTTTGTTTAAGCCTGGAATAAAAGAGGGGGGGAAAA
AGCTTTAAGCCACAAAAAAGTGACTAAGCTTTCTCAACCGCTTTTCTTCATAATGCATTC
TATTT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
12-363, gnl|bosTau2|chr9 (57253797-57253446) |
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12-363, gnl|canFam2|chr1 (49577332-49577605) |
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12-363, gnl|dasNov1|scaffold_40686 (11003-10716) |
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12-363, gnl|echTel1|scaffold_278833 (178874-178588) |
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12-363, gnl|galGal2|chr3 (50210824-50211101) |
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12-363, gnl|hg17|chr6 (157356318-157356607) |
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12-363, gnl|Hg17|chr6 (157356373-157356730) |
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12-363, gnl|loxAfr1|scaffold_2094 (68708-68464) |
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12-363, gnl|mm7|chr17 (5076852-5077146) |
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12-363, gnl|Mm7|chr17 (5076918-5077268) |
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12-363, gnl|monDom2|scaffold_0 (47141894-47141601) |
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12-363, gnl|oryCun1|scaffold_173677 (45411-45123) |
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12-363, gnl|panTro1|chr5 (161033279-161033568) |
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12-363, gnl|rheMac2|chr4 (106007998-106007709) |
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12-363, gnl|rn3|chr1 (40116166-40116516) |
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12-363, gnl|xenTro1|scaffold_124 (1840645-1840358) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
12-363, gnl|bosTau2|chr9 (57253797-57253446) |
|
12-363, gnl|canFam2|chr1 (49577332-49577605) |
|
12-363, gnl|dasNov1|scaffold_40686 (11003-10716) |
|
12-363, gnl|echTel1|scaffold_278833 (178874-178588) |
|
12-363, gnl|galGal2|chr3 (50210824-50211101) |
|
12-363, gnl|hg17|chr6 (157356318-157356607) |
|
12-363, gnl|Hg17|chr6 (157356373-157356730) |
|
12-363, gnl|loxAfr1|scaffold_2094 (68708-68464) |
|
12-363, gnl|mm7|chr17 (5076852-5077146) |
|
12-363, gnl|Mm7|chr17 (5076918-5077268) |
|
12-363, gnl|monDom2|scaffold_0 (47141894-47141601) |
|
12-363, gnl|oryCun1|scaffold_173677 (45411-45123) |
|
12-363, gnl|panTro1|chr5 (161033279-161033568) |
|
12-363, gnl|rheMac2|chr4 (106007998-106007709) |
|
12-363, gnl|rn3|chr1 (40116166-40116516) |
|
12-363, gnl|xenTro1|scaffold_124 (1840645-1840358) |
