Non-Coding RNA Search

OvaF-UMC-pfeto1-019-h01

Sequence:


               
               CTTCTGATCAACAGACCAGTCATGTCATGTGTCTTCCTAAATTGCAGTACTTGTGGCCGG
TTTCATTTCTGCTCAATACTTGGGCTCTTTTCAGTTACCTTTGGGTTTGTGGGTAATCTG
GAAAGTTGAAGATGTCAGATGCTGCACTGCTGGAGATCTTACCAGAGCGAGCTTCTTATA
GATTTCAGGAAGCTGAACACAGACATTAGACAGCAACACACATCCACCACTTCATCAACT
TATGATCTATAGACTACTCTAAGACAGTTGAGACGCTCTCTTTTCCAGCTTATATGTGCA
TCTGAAATATGTGCATTCTCAGCTCGAGCTAGGATTTGCAAGAAATATTTAAAGCTTGCT
CAGCATGGTACTTTCAATCATGTTCTATAAATGGATGCTGGTAAGTGAGGCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTCTGATCAACAGACCAGTCATGTCATGTGTCTTCCTAAATTGCAGTACTTGTGGCCGG
TTTCATTTCTGCTCAATACTTGGGCTCTTTTCAGTTACCTTTGGGTTTGTGGGTAATCTG
GAAAGTTGAAGATGTCAGATGCTGCACTGCTGGAGATCTTACCAGAGCGAGCTTCTTATA
GATTTCAGGAAGCTGAACACAGACATTAGACAGCAACACACATCCACCACTTCATCAACT
TATGATCTATAGACTACTCTAAGACAGTTGAGACGCTCTCTTTTCCAGCTTATATGTGCA
TCTGAAATATGTGCATTCTCAGCTCGAGCTAGGATTTGCAAGAAATATTTAAAGCTTGCT
CAGCATGGTACTTTCAATCATGTTCTATAAATGGATGCTGGTAAGTGAGGCAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               286-413, - strand, RNAz p=0.586663

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               286-413, - strand, RNAz p=0.586663

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               17-413, gnl|bosTau2|chr10 (29213971-29214372)
               

               
               17-413, gnl|Hg17|chr14 (50328055-50328494)
               

               
               17-413, gnl|Mm7|chr12 (68017332-68017806)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-413, gnl|bosTau2|chr10 (29213971-29214372)
               

               
               17-413, gnl|Hg17|chr14 (50328055-50328494)
               

               
               17-413, gnl|Mm7|chr12 (68017332-68017806)

	17-413, gnl\|bosTau2\|chr10 (29213971-29214372)
	17-413, gnl\|Hg17\|chr14 (50328055-50328494)
	17-413, gnl\|Mm7\|chr12 (68017332-68017806)