Non-Coding RNA Search

Ovi1-UMC-pd3ov2-001-e02

Sequence:


               
               TGTCCAAGATTAATTATGTATTAGCACTTGTGTACATAGGGGCTATGTGTATGTATATAC
TTGTGTGTGTGTATATATATATAAACACACAATTGCTTTTATTTAATTAAATATCTCTGA
AAAGATACTTAAACTGAAAACATTGGTGATTCTTAGGGAGAGGAACTAAGATAGATTGGG
ACAAATAAGAAGAAGACTTTTTGAATTTCAGACTATGAATATAAACAGTTTTGAAATATG
AATAAATAAAATTAAGGAAACATATGGGTGGCCAACAGTCAAATAATAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCCAAGATTAATTATGTATTAGCACTTGTGTACATAGGGGCTATGTGTATGTATATAC
TTGTGTGTGTGTATATATATATAAACACACAATTGCTTTTATTTAATTAAATATCTCTGA
AAAGATACTTAAACTGAAAACATTGGTGATTCTTAGGGAGAGGAACTAAGATAGATTGGG
ACAAATAAGAAGAAGACTTTTTGAATTTCAGACTATGAATATAAACAGTTTTGAAATATG
AATAAATAAAATTAAGGAAACATATGGGTGGCCAACAGTCAAATAATAC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               7-118, + strand, RNAz p=0.99863

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               7-118, + strand, RNAz p=0.99863

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               36-112, + strand, RNAmicro p=0.999268

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               36-112, + strand, RNAmicro p=0.999268

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               7-286, gnl|bosTau2|chr21 (37300326-37300041)
               

               
               7-286, gnl|Hg17|chr14 (44748217-44747927)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-286, gnl|bosTau2|chr21 (37300326-37300041)
               

               
               7-286, gnl|Hg17|chr14 (44748217-44747927)

	7-286, gnl\|bosTau2\|chr21 (37300326-37300041)
	7-286, gnl\|Hg17\|chr14 (44748217-44747927)