Non-Coding RNA Search

Ovi1-UMC-pd3ov3-003-h11

Sequence:


               
               ACCTAATAAAACCAAAAAAGACCAATCCagttccctgatgggttagtggttaaggatcag
gcattgtcactgctgtggcccaggttcaactcctggtccaggatcttctgcaAGTTGCCA
GCATGGCCAAATTAATTAAAATAAATTTAAAACTAGCTGGAAAAACTGAGATTTCTAAAG
CTGTTAGTTTGCGAACACCAAAACAATTTACTATTTACTTTTTTTCTGATGTACTTCTTA
TAAAGTGCAAGATATGACTTGGCAACACTCGTTTTCAAATAATATGGAGTATGGAATATT
TCAAATAATGTTTATGTAATAAAACTCCTTGTGATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTAATAAAACCAAAAAAGACCAATCCagttccctgatgggttagtggttaaggatcag
gcattgtcactgctgtggcccaggttcaactcctggtccaggatcttctgcaAGTTGCCA
GCATGGCCAAATTAATTAAAATAAATTTAAAACTAGCTGGAAAAACTGAGATTTCTAAAG
CTGTTAGTTTGCGAACACCAAAACAATTTACTATTTACTTTTTTTCTGATGTACTTCTTA
TAAAGTGCAAGATATGACTTGGCAACACTCGTTTTCAAATAATATGGAGTATGGAATATT
TCAAATAATGTTTATGTAATAAAACTCCTTGTGATTCT

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               32-104, tRNA Pseudo, RaveNnA Score=26.76

ncRNA annotation: 1 entry(ies)

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PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               32-104, tRNA Pseudo, RaveNnA Score=26.76