Non-Coding RNA Search

Ovi2-UMC-peov3-007-g03

Sequence:


               
               TGCTCTTCACATAATTTATGCTTTCTGTTCTCTGGTACCTGAGGCTCAGATAATAAGTTA
TTCTATCTGGAAATAGCTGGTATAATTCTTCTGTAAGTCATGTTATCATTCTGTAAAATA
ATCCTAAAATGTGCTAAATGATGCTGTTGTGGTATATGCACCCAAATAGTAAGCAAACTT
GTCTAAATTTTACTATGAGAGACTTGACCATAGTGTCTACACCATGGATTTAATGAAAGC
AATCCAGGGCACTTTAGTGTATCCTCAAATCATTGTTTTGTCAGAATAACATACATTTGT
CTCATCCTTTTGTTTTTTTGACAAACAGAAAAGATAAAGAATTTTCTTATGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGCTCTTCACATAATTTATGCTTTCTGTTCTCTGGTACCTGAGGCTCAGATAATAAGTTA
TTCTATCTGGAAATAGCTGGTATAATTCTTCTGTAAGTCATGTTATCATTCTGTAAAATA
ATCCTAAAATGTGCTAAATGATGCTGTTGTGGTATATGCACCCAAATAGTAAGCAAACTT
GTCTAAATTTTACTATGAGAGACTTGACCATAGTGTCTACACCATGGATTTAATGAAAGC
AATCCAGGGCACTTTAGTGTATCCTCAAATCATTGTTTTGTCAGAATAACATACATTTGT
CTCATCCTTTTGTTTTTTTGACAAACAGAAAAGATAAAGAATTTTCTTATGAAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               198-312, - strand, RNAz p=0.999862

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-312, - strand, RNAz p=0.999862

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-348, gnl|bosTau2|chr5 (10834273-10834623)
               

               
               1-348, gnl|Hg17|chr12 (84874482-84874150)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-348, gnl|bosTau2|chr5 (10834273-10834623)
               

               
               1-348, gnl|Hg17|chr12 (84874482-84874150)

	1-348, gnl\|bosTau2\|chr5 (10834273-10834623)
	1-348, gnl\|Hg17\|chr12 (84874482-84874150)