Pey1-22B08b
|
CGCCGCCCTGGTCACCTCGATGGCTGGAGACACCAGGGTCCGCATCTTTGAGCAGCAGTT
GGCTTCTGAGCCAGAGACCTTCATTCCTTGTTCCCTTGGACAGCTGGGCCCAGCGCCCCG
CCCAGCAGCCAAGCGGCATCTGCTGCTTCTGGGAAGGAACTTCTTGCAGTGGAGGAGACC
CACCCAGCAGGCTGCCAAAGCCGTGCAGCGCTTCGAGCCGGGAGGCGATGGGAGCTCGGG
GCGGAGTGCTCCCCGGCAGAGGTTCTTGCTGCTGGAGGTCACGGACAAGAAGCTCCAGCT
GCTGACCTACAACTGGGCTCCAGACCTGGGGGCGGCACTGGGCCGAGCACTGGTCCGCCT
GGTGCAGTGGCAGAACGCCCGGGCCCACCTCATCTTCTGCCTCCTCAGCCAGAAGCTTGG
GCTCTTCCACCACTACGGCCAGCTGGACTTCCCGGTGCGGGACGAAAAGGAGCCCAACCC
ATTCCTGCTGCCGACCGTGGAAGCGGAGACCCTCATCCGGTGCGCAAGCCCCCCGCTGAG
CCGCGAGCAGGGCCGGCTGAGCGGGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CGCCGCCCTGGTCACCTCGATGGCTGGAGACACCAGGGTCCGCATCTTTGAGCAGCAGTT
GGCTTCTGAGCCAGAGACCTTCATTCCTTGTTCCCTTGGACAGCTGGGCCCAGCGCCCCG
CCCAGCAGCCAAGCGGCATCTGCTGCTTCTGGGAAGGAACTTCTTGCAGTGGAGGAGACC
CACCCAGCAGGCTGCCAAAGCCGTGCAGCGCTTCGAGCCGGGAGGCGATGGGAGCTCGGG
GCGGAGTGCTCCCCGGCAGAGGTTCTTGCTGCTGGAGGTCACGGACAAGAAGCTCCAGCT
GCTGACCTACAACTGGGCTCCAGACCTGGGGGCGGCACTGGGCCGAGCACTGGTCCGCCT
GGTGCAGTGGCAGAACGCCCGGGCCCACCTCATCTTCTGCCTCCTCAGCCAGAAGCTTGG
GCTCTTCCACCACTACGGCCAGCTGGACTTCCCGGTGCGGGACGAAAAGGAGCCCAACCC
ATTCCTGCTGCCGACCGTGGAAGCGGAGACCCTCATCCGGTGCGCAAGCCCCCCGCTGAG
CCGCGAGCAGGGCCGGCTGAGCGGGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
63-199, gnl|bosTau2|chr3 (71796598-71796734) |
|
63-199, gnl|canFam2|chr15 (19751487-19751339) |
|
63-199, gnl|echTel1|scaffold_321914 (68867-69070) |
|
63-199, gnl|galGal2|chr8 (20053036-20053213) |
|
63-199, gnl|hg17|chr1 (43576739-43576906) |
|
63-199, gnl|Hg17|chr1 (43576766-43576901) |
|
63-199, gnl|loxAfr1|scaffold_66843 (520-352) |
|
63-199, gnl|mm7|chr4 (117750022-117749850) |
|
63-199, gnl|Mm7|chr4 (117749992-117749859) |
|
63-199, gnl|monDom2|scaffold_87 (29225-29057) |
|
63-199, gnl|oryCun1|scaffold_158185 (31780-31613) |
|
63-199, gnl|panTro1|chr1 (44556451-44556618) |
|
63-199, gnl|rheMac2|chr1 (46349626-46349793) |
|
63-199, gnl|rn3|chr5 (138858697-138858529) |
|
63-199, gnl|xenTro1|scaffold_1 (5695038-5695195) |
| |
|
291-474, gnl|bosTau2|chr3 (71797036-71797219) |
|
291-474, gnl|Hg17|chr1 (43577204-43577387) |
|
291-474, gnl|Mm7|chr4 (117749572-117749389) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
63-199, gnl|bosTau2|chr3 (71796598-71796734) |
|
63-199, gnl|canFam2|chr15 (19751487-19751339) |
|
63-199, gnl|echTel1|scaffold_321914 (68867-69070) |
|
63-199, gnl|galGal2|chr8 (20053036-20053213) |
|
63-199, gnl|hg17|chr1 (43576739-43576906) |
|
63-199, gnl|Hg17|chr1 (43576766-43576901) |
|
63-199, gnl|loxAfr1|scaffold_66843 (520-352) |
|
63-199, gnl|mm7|chr4 (117750022-117749850) |
|
63-199, gnl|Mm7|chr4 (117749992-117749859) |
|
63-199, gnl|monDom2|scaffold_87 (29225-29057) |
|
63-199, gnl|oryCun1|scaffold_158185 (31780-31613) |
|
63-199, gnl|panTro1|chr1 (44556451-44556618) |
|
63-199, gnl|rheMac2|chr1 (46349626-46349793) |
|
63-199, gnl|rn3|chr5 (138858697-138858529) |
|
63-199, gnl|xenTro1|scaffold_1 (5695038-5695195) |
| |
|
291-474, gnl|bosTau2|chr3 (71797036-71797219) |
|
291-474, gnl|Hg17|chr1 (43577204-43577387) |
|
291-474, gnl|Mm7|chr4 (117749572-117749389) |
