Pey1-25E09
|
GTCCGGAACTTCTAGATCGCCCCCTTCTCAGAAAACGCAGAAGAGAGATGGAAGAAAAAG
TCACACTGCTTAATGCACCTACAAAGAGACCAAGGTCAAGCACTGTGACTGAAACACCCA
TTGCTGTGGTAACATCCCGAACCAGTGAAGTCTATGTTTGGGGTGGTGGGAAATCCACTC
CCCAGAAACTGGATGTCATCAAGAGTGGCTGTAGTGCCCGGCAGGTGTGTGCAGGGAATA
CCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTCTACACCTGGGTGAACATGCAAGGGG
GTACTAAACTCCATGGTCAGCTGGGTCATGGAGACAAAGCTTCCTACCGACAGCCGAAGC
ATGTGGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCTTGTGGTGATGATTTCACTG
TCTGTGTGACAGATGAAGGTCAGCTCTATGCCTTTGGATCTGACTATTATGGCTGCATGG
GGGTGGACAAGGTTGCTGGCCCTGAAGTGTTAGAGCCCATGCAGCTGAACTTCTTCTCGA
ACAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTAGTTTTGACA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTCCGGAACTTCTAGATCGCCCCCTTCTCAGAAAACGCAGAAGAGAGATGGAAGAAAAAG
TCACACTGCTTAATGCACCTACAAAGAGACCAAGGTCAAGCACTGTGACTGAAACACCCA
TTGCTGTGGTAACATCCCGAACCAGTGAAGTCTATGTTTGGGGTGGTGGGAAATCCACTC
CCCAGAAACTGGATGTCATCAAGAGTGGCTGTAGTGCCCGGCAGGTGTGTGCAGGGAATA
CCCACTTTGCTGTGGTCACAGTGGAGAAGGAACTCTACACCTGGGTGAACATGCAAGGGG
GTACTAAACTCCATGGTCAGCTGGGTCATGGAGACAAAGCTTCCTACCGACAGCCGAAGC
ATGTGGAAAAGTTGCAAGGCAAAGCTATCCGTCAGGTGTCTTGTGGTGATGATTTCACTG
TCTGTGTGACAGATGAAGGTCAGCTCTATGCCTTTGGATCTGACTATTATGGCTGCATGG
GGGTGGACAAGGTTGCTGGCCCTGAAGTGTTAGAGCCCATGCAGCTGAACTTCTTCTCGA
ACAATCCAGTGGAGCAGGTCTCCTGTGGAGATAATCATGTGGTAGTTTTGACA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
93-287, gnl|bosTau2|chr10 (56714991-56714797) |
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93-287, gnl|canFam2|chr8 (51241691-51241896) |
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93-287, gnl|danRer3|chr9 (545995-546198) |
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93-287, gnl|dasNov1|scaffold_2022 (121484-121689) |
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93-287, gnl|echTel1|scaffold_317142 (99171-99376) |
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93-287, gnl|fr1|chrUn (290522719-290522920) |
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93-287, gnl|galGal2|chr5 (35021978-35022162) |
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93-287, gnl|hg17|chr14 (74646135-74646340) |
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93-287, gnl|Hg17|chr14 (74646335-74646141) |
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93-287, gnl|loxAfr1|scaffold_29592 (63097-62887) |
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93-287, gnl|mm7|chr12 (83320547-83320752) |
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93-287, gnl|Mm7|chr12 (83320747-83320553) |
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93-287, gnl|monDom2|scaffold_8 (59380912-59380705) |
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93-287, gnl|oryCun1|scaffold_208875 (33720-33925) |
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93-287, gnl|panTro1|chr15 (74674216-74674421) |
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93-287, gnl|rheMac2|chr7 (138221303-138221508) |
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93-287, gnl|rn3|chr6 (109373270-109373475) |
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93-287, gnl|tetNig1|chr10 (4806803-4807003) |
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93-287, gnl|xenTro1|scaffold_423 (238583-238378) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
93-287, gnl|bosTau2|chr10 (56714991-56714797) |
|
93-287, gnl|canFam2|chr8 (51241691-51241896) |
|
93-287, gnl|danRer3|chr9 (545995-546198) |
|
93-287, gnl|dasNov1|scaffold_2022 (121484-121689) |
|
93-287, gnl|echTel1|scaffold_317142 (99171-99376) |
|
93-287, gnl|fr1|chrUn (290522719-290522920) |
|
93-287, gnl|galGal2|chr5 (35021978-35022162) |
|
93-287, gnl|hg17|chr14 (74646135-74646340) |
|
93-287, gnl|Hg17|chr14 (74646335-74646141) |
|
93-287, gnl|loxAfr1|scaffold_29592 (63097-62887) |
|
93-287, gnl|mm7|chr12 (83320547-83320752) |
|
93-287, gnl|Mm7|chr12 (83320747-83320553) |
|
93-287, gnl|monDom2|scaffold_8 (59380912-59380705) |
|
93-287, gnl|oryCun1|scaffold_208875 (33720-33925) |
|
93-287, gnl|panTro1|chr15 (74674216-74674421) |
|
93-287, gnl|rheMac2|chr7 (138221303-138221508) |
|
93-287, gnl|rn3|chr6 (109373270-109373475) |
|
93-287, gnl|tetNig1|chr10 (4806803-4807003) |
|
93-287, gnl|xenTro1|scaffold_423 (238583-238378) |
