Non-Coding RNA Search

Pey1-46D08

Sequence:


               
               CTTTGTTACAGCAGTCTGGAATTGAACCAGCAGTGTCTCTGAGGTATGCCTGTTCACAAG
TCCAAGAAACACTGCTTAGAGCTTTATAATTCTTGAAGACTATTTTTAATCACTTATTTT
TACACTTAAAAAGAATAAGAGTTTTAGCCTGGGAACTTCCATATGCCATGGGTGTGGCCC
ACCCAAAAAAAAGATTTTTAAATCCGTCGTGTGTTTTCAGGTCTAATCATTTTGAATATT
AATAAACTCATTTAAACTGAAGATTAAGAAAATACTTAATATAATTTCCTAGAAAGTATG
TGTGATTTGATTGAAGTAGCTTTGAAATCTTTTATTTGTCTTTTTTCTTTTTATAGATAC
TAAAATGGACCGTAAAGATAAGTTATTTGTGATTAACGAGGTAATTTTAGAACATAATTA
AAATATTCTAACAGCACTGTATTTAGGAACAGAATATTTTGGAATGCTAAAAATAGTTCA
TTAAAAAATATTGTGACTTTTAAGTTGTTTTGTATAAGAACCTCAAATTTTATTAACTTT
AATGATCTGCCTTCTAAATTTTTATAGTACTTACGTCTGTTTCTTACAGTTTAGTGCTTC
AGTATATATTATTTTTTGATCGTTCTTAACATTTGTCTTCTCTTAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTGTTACAGCAGTCTGGAATTGAACCAGCAGTGTCTCTGAGGTATGCCTGTTCACAAG
TCCAAGAAACACTGCTTAGAGCTTTATAATTCTTGAAGACTATTTTTAATCACTTATTTT
TACACTTAAAAAGAATAAGAGTTTTAGCCTGGGAACTTCCATATGCCATGGGTGTGGCCC
ACCCAAAAAAAAGATTTTTAAATCCGTCGTGTGTTTTCAGGTCTAATCATTTTGAATATT
AATAAACTCATTTAAACTGAAGATTAAGAAAATACTTAATATAATTTCCTAGAAAGTATG
TGTGATTTGATTGAAGTAGCTTTGAAATCTTTTATTTGTCTTTTTTCTTTTTATAGATAC
TAAAATGGACCGTAAAGATAAGTTATTTGTGATTAACGAGGTAATTTTAGAACATAATTA
AAATATTCTAACAGCACTGTATTTAGGAACAGAATATTTTGGAATGCTAAAAATAGTTCA
TTAAAAAATATTGTGACTTTTAAGTTGTTTTGTATAAGAACCTCAAATTTTATTAACTTT
AATGATCTGCCTTCTAAATTTTTATAGTACTTACGTCTGTTTCTTACAGTTTAGTGCTTC
AGTATATATTATTTTTTGATCGTTCTTAACATTTGTCTTCTCTTAGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               1-115, - strand, RNAz p=0.784195

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-115, - strand, RNAz p=0.784195

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               1-146, gnl|bosTau2|chr19 (28065696-28065556)
               

               
               1-146, gnl|Hg17|chr5 (34955399-34955539)
               


               
               185-643, gnl|bosTau2|chr19 (28065571-28065114)
               

               
               185-643, gnl|Hg17|chr5 (34955523-34956008)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-146, gnl|bosTau2|chr19 (28065696-28065556)
               

               
               1-146, gnl|Hg17|chr5 (34955399-34955539)
               


               
               185-643, gnl|bosTau2|chr19 (28065571-28065114)
               

               
               185-643, gnl|Hg17|chr5 (34955523-34956008)

	1-146, gnl\|bosTau2\|chr19 (28065696-28065556)
	1-146, gnl\|Hg17\|chr5 (34955399-34955539)

	185-643, gnl\|bosTau2\|chr19 (28065571-28065114)
	185-643, gnl\|Hg17\|chr5 (34955523-34956008)