Non-Coding RNA Search

Pey1-53D02

Sequence:


               
               GCGTCCGCTTTTAATGAATAGAAATTCTTGATTTTATTGATGTCTAATTTATTGATTTCT
TTTTCTTTTATAATTTGTGCTTATGTTCTGTTTAGGAAATCTTTTCATTCCCAAGGTACT
GAAAAGATTCTCCAACTTTTTTTTCTAGAGGTTTTATTATTTTACCTTTCACATTTAGGT
ATATGATTTATCTTACATTGGTGTTGGTATATGATATGAGATAGGTATCAAAGTTCATAT
TTTTAAATGTGGAAATCTAATTGCTTGTGATAAAATACAGCAAGCTAGGAAAGGAAAGGA
ACTTCCTTAGTCTGAGAGTAAGTATTTATCGAAAATCCATagctaaccttattcttaatg
atgaaatattgaacgctttccccctgaggttgggaacaagagaaggatgtctgctatcac
cacttgtaatcaacttcatgttggaggttccaaacagtacgaaataaggcaagaaaaaga
aataaaagATTGGAACAGAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGTCCGCTTTTAATGAATAGAAATTCTTGATTTTATTGATGTCTAATTTATTGATTTCT
TTTTCTTTTATAATTTGTGCTTATGTTCTGTTTAGGAAATCTTTTCATTCCCAAGGTACT
GAAAAGATTCTCCAACTTTTTTTTCTAGAGGTTTTATTATTTTACCTTTCACATTTAGGT
ATATGATTTATCTTACATTGGTGTTGGTATATGATATGAGATAGGTATCAAAGTTCATAT
TTTTAAATGTGGAAATCTAATTGCTTGTGATAAAATACAGCAAGCTAGGAAAGGAAAGGA
ACTTCCTTAGTCTGAGAGTAAGTATTTATCGAAAATCCATagctaaccttattcttaatg
atgaaatattgaacgctttccccctgaggttgggaacaagagaaggatgtctgctatcac
cacttgtaatcaacttcatgttggaggttccaaacagtacgaaataaggcaagaaaaaga
aataaaagATTGGAACAGAAAAAAAAAAAAAAAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               93-286, - strand, RNAz p=0.852494

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               93-286, - strand, RNAz p=0.852494

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               8-506, gnl|bosTau2|chr3 (30559095-30558598)
               

               
               8-506, gnl|Hg17|chr1 (109475343-109476181)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-506, gnl|bosTau2|chr3 (30559095-30558598)
               

               
               8-506, gnl|Hg17|chr1 (109475343-109476181)

	8-506, gnl\|bosTau2\|chr3 (30559095-30558598)
	8-506, gnl\|Hg17\|chr1 (109475343-109476181)