Non-Coding RNA Search

Pig1-106F19

Sequence:


               
               GCCCCTCCCAGCTCTCACTCAGTTCCCCCAGCTCAAAGTGCCTCAGTTCCTCCATCTGCT
CACCCCAGCCCTCCAGCACTCTAGATGGGAAAGACCCTGGGATGGGAGAGGCAGGTTCAG
GCCTGCCCATTAGGATTCTGGTTAACTCAGCCCAGGGTGCAGGGGCTCTGTGGGATGGCA
AGTGTTGAGGGGAGGGAGGCAGACCACTCTGTGCCCCACGGGCACCAACCTACCCTGCCA
TGGGCTTCCCAAGGGAGCCCCCAGCCCCCGCCCTACTCCTCCCCTCCCTGGTGCTGCTGT
TGAACCCCCAGCCAGCTCCATCTCTGCCCTGGCAACCCTGGACCCACTAGCTGGGCGACC
CTCCTCTCCCAGCCCCCACTGCCCTAGCCCCAGCCCAGACCACCCAGTAGCCACGTAGCA
GAAGTCTGAAGCCATGCCAGCCCTGGGGCAGATCTCCCCTCTCTTGGCATTGGGGGTACT
GGATGGGGTGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCCTCCCAGCTCTCACTCAGTTCCCCCAGCTCAAAGTGCCTCAGTTCCTCCATCTGCT
CACCCCAGCCCTCCAGCACTCTAGATGGGAAAGACCCTGGGATGGGAGAGGCAGGTTCAG
GCCTGCCCATTAGGATTCTGGTTAACTCAGCCCAGGGTGCAGGGGCTCTGTGGGATGGCA
AGTGTTGAGGGGAGGGAGGCAGACCACTCTGTGCCCCACGGGCACCAACCTACCCTGCCA
TGGGCTTCCCAAGGGAGCCCCCAGCCCCCGCCCTACTCCTCCCCTCCCTGGTGCTGCTGT
TGAACCCCCAGCCAGCTCCATCTCTGCCCTGGCAACCCTGGACCCACTAGCTGGGCGACC
CTCCTCTCCCAGCCCCCACTGCCCTAGCCCCAGCCCAGACCACCCAGTAGCCACGTAGCA
GAAGTCTGAAGCCATGCCAGCCCTGGGGCAGATCTCCCCTCTCTTGGCATTGGGGGTACT
GGATGGGGTGGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-399, - strand, RNAz p=0.991689

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-399, - strand, RNAz p=0.991689

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-492, gnl|bosTau2|chr15 (15490839-15490344)
               

               
               1-492, gnl|Hg17|chr11 (119039238-119038738)
               

               
               1-492, gnl|Mm7|chr9 (43739786-43740252)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-492, gnl|bosTau2|chr15 (15490839-15490344)
               

               
               1-492, gnl|Hg17|chr11 (119039238-119038738)
               

               
               1-492, gnl|Mm7|chr9 (43739786-43740252)

	1-492, gnl\|bosTau2\|chr15 (15490839-15490344)
	1-492, gnl\|Hg17\|chr11 (119039238-119038738)
	1-492, gnl\|Mm7\|chr9 (43739786-43740252)