Non-Coding RNA Search

Pig1-106P06

Sequence:


               
               TCGACGTGTGTTCCCACGGGGCCTTCCCGGTGAGTTCGCGCTGGTGCTGACGCTACTGCN
TGAAGAAACACACCCATCAGAACACGTGGTATTTGTTTCAAGTGACCGATGGAGATGGGT
ACCCGCAGATTTCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAGCTCCGGGCTCGGG
GCCAAGACGGCGACTTTGTGTCCTGCATCTTCTTGGTGCCCCAGCTCTTCGACCTGCGTT
GGCACAAGCTGGTGCTGAGCGTGGCCGAACGGGTGGCCTCCGTGCATGTGGACTGTACAT
CAGCCTCCTCCCGGCCCCTGGGGCCCCGGCGGCCCATTAGGCCTGTGGGTCATGTCTTTC
TGGGCTTGGATGCTGAGCAGGGCAAACCTGTCTCGTTTGACCTTCAGCAGGCACACATCT
ATTGTGACCCGGAGTTTGTGCTGGAGGAGGGCTGCTGTGAGATTTCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGACGTGTGTTCCCACGGGGCCTTCCCGGTGAGTTCGCGCTGGTGCTGACGCTACTGCN
TGAAGAAACACACCCATCAGAACACGTGGTATTTGTTTCAAGTGACCGATGGAGATGGGT
ACCCGCAGATTTCCCTGGAAGTCAACAGCCAAGAGCGGAGCCTGGAGCTCCGGGCTCGGG
GCCAAGACGGCGACTTTGTGTCCTGCATCTTCTTGGTGCCCCAGCTCTTCGACCTGCGTT
GGCACAAGCTGGTGCTGAGCGTGGCCGAACGGGTGGCCTCCGTGCATGTGGACTGTACAT
CAGCCTCCTCCCGGCCCCTGGGGCCCCGGCGGCCCATTAGGCCTGTGGGTCATGTCTTTC
TGGGCTTGGATGCTGAGCAGGGCAAACCTGTCTCGTTTGACCTTCAGCAGGCACACATCT
ATTGTGACCCGGAGTTTGTGCTGGAGGAGGGCTGCTGTGAGATTTCACC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               126-244, + strand, RNAz p=0.976964

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               126-244, + strand, RNAz p=0.976964

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               148-243, + strand, RNAmicro p=0.997085

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               148-243, + strand, RNAmicro p=0.997085

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AB209571, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AB209571, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               126-395, gnl|bosTau2|chr2 (75707288-75707019)
               

               
               126-395, gnl|Hg17|chr1 (31832869-31832600)
               

               
               126-395, gnl|Mm7|chr4 (129497898-129498167)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               126-395, gnl|bosTau2|chr2 (75707288-75707019)
               

               
               126-395, gnl|Hg17|chr1 (31832869-31832600)
               

               
               126-395, gnl|Mm7|chr4 (129497898-129498167)

	126-395, gnl\|bosTau2\|chr2 (75707288-75707019)
	126-395, gnl\|Hg17\|chr1 (31832869-31832600)
	126-395, gnl\|Mm7\|chr4 (129497898-129498167)