Non-Coding RNA Search

Pig1-107H24

Sequence:


               
               GCGAGTATCATCCAGAATACTGGATGGACCAGGGGTCAAACTGGACAGAAGGCCAGAACT
GGAAGGGCCTTGTCATTGTGGGAAGGCCATCAAGCCAGAGAGGACAAGGCGTGTGCCCAT
GTGACTTAGCAAGCTGAGAGCTGCACCAGCAAAGCCCTTTCTCCACCCCGATCCACTGCC
TCTCCCCAGCACTATAAGCTTGGTGGCCAGGGTTAGGTGACAGGTGGTGCCAGTCACCAG
CCAAGCCTCTTGGCTTCGCCCCTTCTACCTGGCTCCCTCCCATTAGCCTGGGGCCAAGGA
AGCTGCAGTCTGGAAGCTGGAGTGCCCCCAAGTGGTGAGAGCCTGAAAATTACTCTTTCT
GTCACATCTTAGAAGGTTTAATTTCTTCTCCATGAGACAGGGCAGTTGCTGCTGCTCCTC
TCTCTTGGCAATGAGCCTAAAGTTCATATTCCCCTCCCTATATAGTGAAAAGGGACACTC
ACACCTGTCCAGGATTTTCTGTCTGTGTACAAAGTACTTTGACATTGATTGCCAAAACCC
TCACGGAAAAAACTAAGTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAGTATCATCCAGAATACTGGATGGACCAGGGGTCAAACTGGACAGAAGGCCAGAACT
GGAAGGGCCTTGTCATTGTGGGAAGGCCATCAAGCCAGAGAGGACAAGGCGTGTGCCCAT
GTGACTTAGCAAGCTGAGAGCTGCACCAGCAAAGCCCTTTCTCCACCCCGATCCACTGCC
TCTCCCCAGCACTATAAGCTTGGTGGCCAGGGTTAGGTGACAGGTGGTGCCAGTCACCAG
CCAAGCCTCTTGGCTTCGCCCCTTCTACCTGGCTCCCTCCCATTAGCCTGGGGCCAAGGA
AGCTGCAGTCTGGAAGCTGGAGTGCCCCCAAGTGGTGAGAGCCTGAAAATTACTCTTTCT
GTCACATCTTAGAAGGTTTAATTTCTTCTCCATGAGACAGGGCAGTTGCTGCTGCTCCTC
TCTCTTGGCAATGAGCCTAAAGTTCATATTCCCCTCCCTATATAGTGAAAAGGGACACTC
ACACCTGTCCAGGATTTTCTGTCTGTGTACAAAGTACTTTGACATTGATTGCCAAAACCC
TCACGGAAAAAACTAAGTCTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               425-537, - strand, RNAz p=0.777844

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               425-537, - strand, RNAz p=0.777844

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-537, gnl|bosTau2|chr15 (41749462-41748922)
               

               
               3-537, gnl|Hg17|chr11 (72792315-72791773)
               

               
               3-537, gnl|Mm7|chr7 (96885103-96885603)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-537, gnl|bosTau2|chr15 (41749462-41748922)
               

               
               3-537, gnl|Hg17|chr11 (72792315-72791773)
               

               
               3-537, gnl|Mm7|chr7 (96885103-96885603)

	3-537, gnl\|bosTau2\|chr15 (41749462-41748922)
	3-537, gnl\|Hg17\|chr11 (72792315-72791773)
	3-537, gnl\|Mm7\|chr7 (96885103-96885603)