Non-Coding RNA Search

Pig1-108G14

Sequence:


               
               GTGGACTGTAAGATGAGGTAGCAATATCACCAGAGGTTGGATCTAACTAAAGACAAAGAG
TTAAAGATGGATTCCTGATGACAGGCCAAAGAGAGTAGAGCCAGGTTCTGTATTTAGCAA
ATGTTTACTGAACACTTAATCTGTGTCCCAAACTGATTGGTCTTGAGGATGCAGATTTGA
CTCAAATGTGATTGATCAAAGGCTCTTTTTCTTTCTCCCCAAATTGGGAGCTTGAGAACT
TTTGGCATCACCCTGTAGCTACTGATCTGCTCCTGACTTTTGAGCAGATGGTAGATGCCT
CTGTTAGTTCTGGCTGCTGTCTTGAATAGGTCATCCACTTGCTCCCACAGGGGTCAAGCT
AGTATTGGAGATCTTCCCTGAGTGTTTGCAGCTGTAATGGAAGACCCATGACCTTGTAAA
ATGAATAGAACCATCTTAGCAAAGGAAGGTCTCTGCTCTTGATATGGGCATTGTGCCAGA
CTGTGGGCCTAGCAAGAGAGGCCCTGTGTAGGAGGAAGGAAAACTGAGTTAGTTAATAGG
AATTTTTACAGGTGCCTCCCTTATCTTTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGGACTGTAAGATGAGGTAGCAATATCACCAGAGGTTGGATCTAACTAAAGACAAAGAG
TTAAAGATGGATTCCTGATGACAGGCCAAAGAGAGTAGAGCCAGGTTCTGTATTTAGCAA
ATGTTTACTGAACACTTAATCTGTGTCCCAAACTGATTGGTCTTGAGGATGCAGATTTGA
CTCAAATGTGATTGATCAAAGGCTCTTTTTCTTTCTCCCCAAATTGGGAGCTTGAGAACT
TTTGGCATCACCCTGTAGCTACTGATCTGCTCCTGACTTTTGAGCAGATGGTAGATGCCT
CTGTTAGTTCTGGCTGCTGTCTTGAATAGGTCATCCACTTGCTCCCACAGGGGTCAAGCT
AGTATTGGAGATCTTCCCTGAGTGTTTGCAGCTGTAATGGAAGACCCATGACCTTGTAAA
ATGAATAGAACCATCTTAGCAAAGGAAGGTCTCTGCTCTTGATATGGGCATTGTGCCAGA
CTGTGGGCCTAGCAAGAGAGGCCCTGTGTAGGAGGAAGGAAAACTGAGTTAGTTAATAGG
AATTTTTACAGGTGCCTCCCTTATCTTTTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               392-511, - strand, RNAz p=0.756175

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               392-511, - strand, RNAz p=0.756175

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-568, gnl|bosTau2|chr2 (4075347-4074783)
               

               
               1-568, gnl|Hg17|chr2 (190250486-190249923)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-568, gnl|bosTau2|chr2 (4075347-4074783)
               

               
               1-568, gnl|Hg17|chr2 (190250486-190249923)

	1-568, gnl\|bosTau2\|chr2 (4075347-4074783)
	1-568, gnl\|Hg17\|chr2 (190250486-190249923)