Pig1-109J07
|
AAGACTTAGAGGGAATGAAGAAATATGTTTTCATTGATGAACAAGTTCCAAAAGAGACCT
TGATCTGGCTTTCAAACAAACAGAAAAGAAATGGCTGCTTTCAAAGTGACGGCAAGATTT
TCAACAATGCCTGGGAGGTTGGCGATGAAGAGGACACTTTACTCACTGCCTATATCGTTG
GTGCATTCCTCGAAGCTGGACTCAATTTCACTTTTCCTGCTCTACGAGATGCCCTCTTTT
GCTTGTCGGAGGCCTTGGAAAATGGTGTCACAAATGGCTATAACCAGGCAATCCTAGCTT
ATGCTTTTGCATTAGCTGGAAAAGAGGAGCAAGCAGACTCCTTACTCCAGATCCTGGATC
AATCTGCTACCAAAAAAAATAATGCGATATATTGNGAAAGAGCGAAGAAACCCAAGACAG
ATGCTTCCCCATCCTTTACTCCTCTGACACCTTCTGCTGAGATGGAAAAGACTTGCTACG
TGCTATTGGCTGTCCTTTCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AAGACTTAGAGGGAATGAAGAAATATGTTTTCATTGATGAACAAGTTCCAAAAGAGACCT
TGATCTGGCTTTCAAACAAACAGAAAAGAAATGGCTGCTTTCAAAGTGACGGCAAGATTT
TCAACAATGCCTGGGAGGTTGGCGATGAAGAGGACACTTTACTCACTGCCTATATCGTTG
GTGCATTCCTCGAAGCTGGACTCAATTTCACTTTTCCTGCTCTACGAGATGCCCTCTTTT
GCTTGTCGGAGGCCTTGGAAAATGGTGTCACAAATGGCTATAACCAGGCAATCCTAGCTT
ATGCTTTTGCATTAGCTGGAAAAGAGGAGCAAGCAGACTCCTTACTCCAGATCCTGGATC
AATCTGCTACCAAAAAAAATAATGCGATATATTGNGAAAGAGCGAAGAAACCCAAGACAG
ATGCTTCCCCATCCTTTACTCCTCTGACACCTTCTGCTGAGATGGAAAAGACTTGCTACG
TGCTATTGGCTGTCCTTTCC
|
|
gi|55637823|ref|XP_508997.1| |
Protein identifier
|
gi|55637823|ref|XP_508997.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-146, gnl|bosTau2|chr5 (59350251-59350397) |
|
1-146, gnl|canFam2|chr27 (39472887-39473063) |
|
1-146, gnl|dasNov1|scaffold_50725 (11074-10898) |
|
1-146, gnl|echTel1|scaffold_278001 (50350-50174) |
|
1-146, gnl|fr1|chrUn (306107026-306106851) |
|
1-146, gnl|galGal2|chrUn (104572415-104572234) |
|
1-146, gnl|hg17|chr12 (9604663-9604839) |
|
1-146, gnl|Hg17|chr12 (9604699-9604845) |
|
1-146, gnl|loxAfr1|scaffold_6357 (64878-64714) |
|
1-146, gnl|mm7|chr6 (128573196-128573021) |
|
1-146, gnl|Mm7|chr6 (128573159-128573013) |
|
1-146, gnl|oryCun1|scaffold_212483 (12262-12086) |
|
1-146, gnl|panTro1|chr10 (10028904-10028728) |
|
1-146, gnl|rheMac2|chr11 (9723907-9723731) |
|
1-146, gnl|rn3|chr4 (165816617-165816441) |
|
1-146, gnl|tetNig1|chr16 (8299323-8299161) |
| |
|
213-382, gnl|bosTau2|chr5 (59352201-59352370) |
|
213-382, gnl|Hg17|chr12 (9608023-9608192) |
|
213-382, gnl|Mm7|chr6 (128570561-128570392) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-146, gnl|bosTau2|chr5 (59350251-59350397) |
|
1-146, gnl|canFam2|chr27 (39472887-39473063) |
|
1-146, gnl|dasNov1|scaffold_50725 (11074-10898) |
|
1-146, gnl|echTel1|scaffold_278001 (50350-50174) |
|
1-146, gnl|fr1|chrUn (306107026-306106851) |
|
1-146, gnl|galGal2|chrUn (104572415-104572234) |
|
1-146, gnl|hg17|chr12 (9604663-9604839) |
|
1-146, gnl|Hg17|chr12 (9604699-9604845) |
|
1-146, gnl|loxAfr1|scaffold_6357 (64878-64714) |
|
1-146, gnl|mm7|chr6 (128573196-128573021) |
|
1-146, gnl|Mm7|chr6 (128573159-128573013) |
|
1-146, gnl|oryCun1|scaffold_212483 (12262-12086) |
|
1-146, gnl|panTro1|chr10 (10028904-10028728) |
|
1-146, gnl|rheMac2|chr11 (9723907-9723731) |
|
1-146, gnl|rn3|chr4 (165816617-165816441) |
|
1-146, gnl|tetNig1|chr16 (8299323-8299161) |
| |
|
213-382, gnl|bosTau2|chr5 (59352201-59352370) |
|
213-382, gnl|Hg17|chr12 (9608023-9608192) |
|
213-382, gnl|Mm7|chr6 (128570561-128570392) |
