Non-Coding RNA Search

Pig1-10L17

Sequence:


               
               GATCAAGCTTTCTCAGGAACAGGTGGCCTTACCCCATAAATCATTAAATACCATTCAGCT
TGAATCATTTTAATGTGACAGTCAAGAGCCAATTGCTCTAATAAAATTGCTCTAATAAAA
TTCTGCTAACCAGCTCTCTCCGTTGCTCTCCAGAACAATCCCAGTCATTCCCAGGGGTGT
CCACGGGCATCCAGAAAGGAGAAGGTGGGATCTACTCCCTTCTTTCTCTTCTCCTGGATG
GCCGCCGGAACCTTGGGCCTCCAACCTCCAAAGCATTTATTCGATTTGAAGTGCAGAGAT
TTTTAAGATAAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATCAAGCTTTCTCAGGAACAGGTGGCCTTACCCCATAAATCATTAAATACCATTCAGCT
TGAATCATTTTAATGTGACAGTCAAGAGCCAATTGCTCTAATAAAATTGCTCTAATAAAA
TTCTGCTAACCAGCTCTCTCCGTTGCTCTCCAGAACAATCCCAGTCATTCCCAGGGGTGT
CCACGGGCATCCAGAAAGGAGAAGGTGGGATCTACTCCCTTCTTTCTCTTCTCCTGGATG
GCCGCCGGAACCTTGGGCCTCCAACCTCCAAAGCATTTATTCGATTTGAAGTGCAGAGAT
TTTTAAGATAAAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               41-271, - strand, RNAz p=0.998855

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               41-271, - strand, RNAz p=0.998855

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               171-266, + strand, RNAmicro p=0.999671

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               171-266, + strand, RNAmicro p=0.999671

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               2-312, gnl|bosTau2|chr28 (33672965-33673265)
               

               
               2-312, gnl|Hg17|chr10 (44192181-44191887)
               

               
               2-312, gnl|Mm7|chr6 (117201743-117202042)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-312, gnl|bosTau2|chr28 (33672965-33673265)
               

               
               2-312, gnl|Hg17|chr10 (44192181-44191887)
               

               
               2-312, gnl|Mm7|chr6 (117201743-117202042)

	2-312, gnl\|bosTau2\|chr28 (33672965-33673265)
	2-312, gnl\|Hg17\|chr10 (44192181-44191887)
	2-312, gnl\|Mm7\|chr6 (117201743-117202042)