Non-Coding RNA Search

Pig1-111B04

Sequence:


               
               atcaaacctgcatcttcatggatactagttggattcctttctgctgagccttgatgggaa
ctcAATGATTCCTAATTTTTTTGTCTCAACCTAAACTTCCTCTGAGGTCCAGATTCTGAT
ATCTGACTGCTTTCATGTCCATTTGCCGTATCTACTTGACCAACTAATTGGCATTTCAAA
CTTTAAATGTTCAACGTAAACTGATTTCTCTCCCAGTCTTGCACTTCTTGCAGTCTTTAC
TGCCTTGGTTAAGGGTACCTCCACTTACCCAGCTGCCTCGGCCCAAAGGCTTGGAGTCAT
CTTGGATGACTCTCATTCTCTCACATTCTACATTCAAGACATGAGCAGGTCCTTTGAACA
TCTAaccacttctttccacctccactgctaccaccctggtccaagccatcatcatctctt
tcttgcctggatttctgccatggcctcctaaTTGAGCTTCATCCTGTGTGGAGTGTTCAC
ACAACAGCTAGAACCAGACATTCACACTCTGCTCAGACAATTCCATTGGCTTCCCATCTC
ATTCACTGCCTTTCTCTGCCTCTGGGAACCTACTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               atcaaacctgcatcttcatggatactagttggattcctttctgctgagccttgatgggaa
ctcAATGATTCCTAATTTTTTTGTCTCAACCTAAACTTCCTCTGAGGTCCAGATTCTGAT
ATCTGACTGCTTTCATGTCCATTTGCCGTATCTACTTGACCAACTAATTGGCATTTCAAA
CTTTAAATGTTCAACGTAAACTGATTTCTCTCCCAGTCTTGCACTTCTTGCAGTCTTTAC
TGCCTTGGTTAAGGGTACCTCCACTTACCCAGCTGCCTCGGCCCAAAGGCTTGGAGTCAT
CTTGGATGACTCTCATTCTCTCACATTCTACATTCAAGACATGAGCAGGTCCTTTGAACA
TCTAaccacttctttccacctccactgctaccaccctggtccaagccatcatcatctctt
tcttgcctggatttctgccatggcctcctaaTTGAGCTTCATCCTGTGTGGAGTGTTCAC
ACAACAGCTAGAACCAGACATTCACACTCTGCTCAGACAATTCCATTGGCTTCCCATCTC
ATTCACTGCCTTTCTCTGCCTCTGGGAACCTACTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               125-317, - strand, RNAz p=0.98186

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               125-317, - strand, RNAz p=0.98186

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               98-575, gnl|bosTau2|chr8 (41411199-41410695)
               

               
               98-575, gnl|Hg17|chr9 (34622919-34622411)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               98-575, gnl|bosTau2|chr8 (41411199-41410695)
               

               
               98-575, gnl|Hg17|chr9 (34622919-34622411)

	98-575, gnl\|bosTau2\|chr8 (41411199-41410695)
	98-575, gnl\|Hg17\|chr9 (34622919-34622411)