Non-Coding RNA Search

Pig1-111L11

Sequence:


               
               GGCTGGAAGACGAGCCTGCAGGATGTTTCCTCAGTGAAAGGAAGGCTGTTGCACCATGGC
GGTTTTTGATACTCCGGAGGAGGCCTTCGGCGTCTTGCGTCCTGTCTGTGTTCAGCTCAC
AAAGGCGCAGACCGTGGAGAATGTGGCGCACCTGCAGGCACAGTTGCAAGCCGTGAGTGA
CTCTGCCCTTCAGGAACTTCAGCAGTACATCCTCTTCCCTTTGCGATTTACCCTGAAGAC
CCCAGGTCCCAAAAGAGAACGCTTGATCCAGAGCGTGGTGGAGTGCATCACCTTTGTCCT
CTCTTCGACGTGTGTGAAGGAGCAAGAACTTCTCCAGGAACTCTTTTCGGAGCTGTCTGC
TTGCCTGTATTCGCCCAGCTCCCAAAAACCCGCTGCTGTGTCAGAGGAGTTGAAACTGGC
GGTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTGGAAGACGAGCCTGCAGGATGTTTCCTCAGTGAAAGGAAGGCTGTTGCACCATGGC
GGTTTTTGATACTCCGGAGGAGGCCTTCGGCGTCTTGCGTCCTGTCTGTGTTCAGCTCAC
AAAGGCGCAGACCGTGGAGAATGTGGCGCACCTGCAGGCACAGTTGCAAGCCGTGAGTGA
CTCTGCCCTTCAGGAACTTCAGCAGTACATCCTCTTCCCTTTGCGATTTACCCTGAAGAC
CCCAGGTCCCAAAAGAGAACGCTTGATCCAGAGCGTGGTGGAGTGCATCACCTTTGTCCT
CTCTTCGACGTGTGTGAAGGAGCAAGAACTTCTCCAGGAACTCTTTTCGGAGCTGTCTGC
TTGCCTGTATTCGCCCAGCTCCCAAAAACCCGCTGCTGTGTCAGAGGAGTTGAAACTGGC
GGTGAT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               252-411, - strand, RNAz p=0.721606

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               252-411, - strand, RNAz p=0.721606

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-426, gnl|bosTau2|chr13 (48705939-48706352)
               

               
               13-426, gnl|Hg17|chr20 (36075675-36075262)
               

               
               13-426, gnl|Mm7|chr2 (157750250-157749837)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-426, gnl|bosTau2|chr13 (48705939-48706352)
               

               
               13-426, gnl|Hg17|chr20 (36075675-36075262)
               

               
               13-426, gnl|Mm7|chr2 (157750250-157749837)

	13-426, gnl\|bosTau2\|chr13 (48705939-48706352)
	13-426, gnl\|Hg17\|chr20 (36075675-36075262)
	13-426, gnl\|Mm7\|chr2 (157750250-157749837)