Non-Coding RNA Search

Pig1-112B07

Sequence:


               
               GCCAGACATTCCAGTGCAGCGTCCTGCTCGTAGCCACTGGCTTGTCAGTTCCCAACCAGG
TTGACTTTCCTGGCGCCGAATACATGGATGGTTATGAGTCCGTGTCGGTGGATCCCAAGG
ATTTTGTGGGTCAGAATGTGCTGATCCTGGGCCGGGGGAACTCGGCCTTTGAGACAGCGG
AGAACATCCTGGGCGTCACCAACTTTATCCACATGCTGAGCCGCTCCCGGGTCCGGCTGT
CCTGGGCCACCCACTACGTTGGCGACCTCAGGGCCATCAACAACGGCCTGCTGGACACCT
ACCAGCTGAAGTCCCTGGATGGGTTGCTGGAGTCCGACCTGGCAAATCTGGCCATCGTGA
AGGACCACAAAGGCAAGTTCCACATCACCCTCAAGCTCTACCTGGAGGTAGGCAACCACA
GCGCCGACGCCATCCCCCTCCCCGAGGACGAAAGTGACAACTTCGCCATGCGTGTGCCCT
ACGACCGGGTCATCCGCTGCCTCGGCTGGAACTTCGACTTCTCCATCTTCAGCAAGTCCC
TCCGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGACATTCCAGTGCAGCGTCCTGCTCGTAGCCACTGGCTTGTCAGTTCCCAACCAGG
TTGACTTTCCTGGCGCCGAATACATGGATGGTTATGAGTCCGTGTCGGTGGATCCCAAGG
ATTTTGTGGGTCAGAATGTGCTGATCCTGGGCCGGGGGAACTCGGCCTTTGAGACAGCGG
AGAACATCCTGGGCGTCACCAACTTTATCCACATGCTGAGCCGCTCCCGGGTCCGGCTGT
CCTGGGCCACCCACTACGTTGGCGACCTCAGGGCCATCAACAACGGCCTGCTGGACACCT
ACCAGCTGAAGTCCCTGGATGGGTTGCTGGAGTCCGACCTGGCAAATCTGGCCATCGTGA
AGGACCACAAAGGCAAGTTCCACATCACCCTCAAGCTCTACCTGGAGGTAGGCAACCACA
GCGCCGACGCCATCCCCCTCCCCGAGGACGAAAGTGACAACTTCGCCATGCGTGTGCCCT
ACGACCGGGTCATCCGCTGCCTCGGCTGGAACTTCGACTTCTCCATCTTCAGCAAGTCCC
TCCGAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               54-173, + strand, RNAz p=0.72618

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               54-173, + strand, RNAz p=0.72618

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of BC027716, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC027716, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               15-272, gnl|bosTau2|chr5 (45506274-45506531)
               

               
               15-272, gnl|Hg17|chr22 (35225318-35225061)
               

               
               15-272, gnl|Mm7|chr15 (78036491-78036234)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               15-272, gnl|bosTau2|chr5 (45506274-45506531)
               

               
               15-272, gnl|Hg17|chr22 (35225318-35225061)
               

               
               15-272, gnl|Mm7|chr15 (78036491-78036234)

	15-272, gnl\|bosTau2\|chr5 (45506274-45506531)
	15-272, gnl\|Hg17\|chr22 (35225318-35225061)
	15-272, gnl\|Mm7\|chr15 (78036491-78036234)