Pig1-112I17
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGCTTTGGGGACAGATGGGCAGGAATCTGGAAGAATCGCCAGTCACCCTCAGACTCTG GTCCCTAGGACCTGCCGTTCTTGCAGCACTCCTTCCAAGCCCAATTAGGATGCGCTGGGG CGCCCGTGCCCGCCCCGCTCAAGCGAGCCTCCGCCCCGACCTTCGACAACGACTACAGCC TCTCCGAGCTGCTGTCCCAGCTGGACTCGGGCGTCTCCCAGCCCCTCCAGGGCCCGGAGG ACCTCAGCCGCAGCTCCTCCGAATCCAAGCTCCCGTCCGCCAGCAGCGGCAAGAGGCTCT CAGGCGTGTCCTCTGTCGATTCCGCCTTCTCCTCCAGAGGGTCGCTGTCCTTGTCCTTCG AGCGGGAGCCTTCCACCAGCGAGCTCGGCACCTCCGACGTCCAGAAGAGGAAGCTCGTGG ATGCCATCGTGAACGGGGACACCAGCAGGCTGATGAAGATCCTGCAGCCGCAGGACGTCG ACCTGGTCCTGGACGGCGGCGCCAGCCTGCTGCACCTGGCCGTGGAGGCCGGGCAGGAGG ACTGCGTCAAGTGGCTGCTGCTCAACAATGCCAACCCCAACCTGACCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGCTTTGGGGACAGATGGGCAGGAATCTGGAAGAATCGCCAGTCACCCTCAGACTCTG GTCCCTAGGACCTGCCGTTCTTGCAGCACTCCTTCCAAGCCCAATTAGGATGCGCTGGGG CGCCCGTGCCCGCCCCGCTCAAGCGAGCCTCCGCCCCGACCTTCGACAACGACTACAGCC TCTCCGAGCTGCTGTCCCAGCTGGACTCGGGCGTCTCCCAGCCCCTCCAGGGCCCGGAGG ACCTCAGCCGCAGCTCCTCCGAATCCAAGCTCCCGTCCGCCAGCAGCGGCAAGAGGCTCT CAGGCGTGTCCTCTGTCGATTCCGCCTTCTCCTCCAGAGGGTCGCTGTCCTTGTCCTTCG AGCGGGAGCCTTCCACCAGCGAGCTCGGCACCTCCGACGTCCAGAAGAGGAAGCTCGTGG ATGCCATCGTGAACGGGGACACCAGCAGGCTGATGAAGATCCTGCAGCCGCAGGACGTCG ACCTGGTCCTGGACGGCGGCGCCAGCCTGCTGCACCTGGCCGTGGAGGCCGGGCAGGAGG ACTGCGTCAAGTGGCTGCTGCTCAACAATGCCAACCCCAACCTGACCA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 157-276, - strand, RNAz p=0.733052 | |
| 416-531, - strand, RNAz p=0.680027 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 157-276, - strand, RNAz p=0.733052 | |
| 416-531, - strand, RNAz p=0.680027 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 119-376, gnl|bosTau2|chr1 (92112177-92111920) | |
| 119-376, gnl|Hg17|chr21 (42037370-42037116) | |
| 119-376, gnl|Mm7|chr16 (98129601-98129341) | |
| 381-588, gnl|bosTau2|chr1 (92110212-92110005) | |
| 381-588, gnl|canFam2|chr31 (38496396-38496739) | |
| 381-588, gnl|danRer3|chr10 (32421407-32421750) | |
| 381-588, gnl|dasNov1|scaffold_66178 (10885-10543) | |
| 381-588, gnl|echTel1|scaffold_288153 (93364-93708) | |
| 381-588, gnl|fr1|chrUn (212948182-212948521) | |
| 381-588, gnl|galGal2|chr1 (102723556-102723897) | |
| 381-588, gnl|hg17|chr21 (42034903-42035247) | |
| 381-588, gnl|Hg17|chr21 (42035227-42035020) | |
| 381-588, gnl|mm7|chr16 (98127397-98127741) | |
| 381-588, gnl|Mm7|chr16 (98127721-98127514) | |
| 381-588, gnl|monDom2|scaffold_29 (1565607-1565958) | |
| 381-588, gnl|oryCun1|scaffold_190720 (4610-4266) | |
| 381-588, gnl|panTro1|chr22 (42136689-42137033) | |
| 381-588, gnl|rheMac2|chr3 (4933686-4933342) | |
| 381-588, gnl|rn3|chr11 (37827400-37827744) | |
| 381-588, gnl|tetNig1|chr7 (1545864-1545525) | |
| 381-588, gnl|xenTro1|scaffold_900 (284077-284421) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 119-376, gnl|bosTau2|chr1 (92112177-92111920) | |
| 119-376, gnl|Hg17|chr21 (42037370-42037116) | |
| 119-376, gnl|Mm7|chr16 (98129601-98129341) | |
| 381-588, gnl|bosTau2|chr1 (92110212-92110005) | |
| 381-588, gnl|canFam2|chr31 (38496396-38496739) | |
| 381-588, gnl|danRer3|chr10 (32421407-32421750) | |
| 381-588, gnl|dasNov1|scaffold_66178 (10885-10543) | |
| 381-588, gnl|echTel1|scaffold_288153 (93364-93708) | |
| 381-588, gnl|fr1|chrUn (212948182-212948521) | |
| 381-588, gnl|galGal2|chr1 (102723556-102723897) | |
| 381-588, gnl|hg17|chr21 (42034903-42035247) | |
| 381-588, gnl|Hg17|chr21 (42035227-42035020) | |
| 381-588, gnl|mm7|chr16 (98127397-98127741) | |
| 381-588, gnl|Mm7|chr16 (98127721-98127514) | |
| 381-588, gnl|monDom2|scaffold_29 (1565607-1565958) | |
| 381-588, gnl|oryCun1|scaffold_190720 (4610-4266) | |
| 381-588, gnl|panTro1|chr22 (42136689-42137033) | |
| 381-588, gnl|rheMac2|chr3 (4933686-4933342) | |
| 381-588, gnl|rn3|chr11 (37827400-37827744) | |
| 381-588, gnl|tetNig1|chr7 (1545864-1545525) | |
| 381-588, gnl|xenTro1|scaffold_900 (284077-284421) |