Non-Coding RNA Search

Pig1-112K06

Sequence:


               
               TCCGGTTGCGCGAGCCGAGGGTGCAGGCGCCGCGGTCGCAGCCGCGTACCGCGCCGTCGC
CGTCGCGAGAGGCATCGCCTAGAAGCTGGAGCCGTGAAGAGCTCGGAGGAGCTCCTAGAC
CGCCCTCCAGCCTTTCTGAGGTCCTTGACTCCGCAGTGAGTGCTCCCTCTTCAGCCAGAA
GGACAAGAAGATCCCAGCGGCACTTCCTCAGGTTCTCCAGCAGGCCTTGGTGGCCCAGCA
TGGCCCACTGAGGTCAACCATGACTGGCTGGCAGACACGTGCCACTGACCACCCAAAGTC
ACAACTCACCAGGAGGTGACCCCTCCCTCCTGCGGTCACCACTCGCCCGCCCCGCCCCAC
CCAGGAAAGTGCCTGCGCCGTCAGGGACACCATGTAGTAGGGCCGGCTGCGGCATCCAAT
GAGCTGCGATGGTTTTGTACACGACCCCCTTTCCCACAGCTGTCTGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCGGTTGCGCGAGCCGAGGGTGCAGGCGCCGCGGTCGCAGCCGCGTACCGCGCCGTCGC
CGTCGCGAGAGGCATCGCCTAGAAGCTGGAGCCGTGAAGAGCTCGGAGGAGCTCCTAGAC
CGCCCTCCAGCCTTTCTGAGGTCCTTGACTCCGCAGTGAGTGCTCCCTCTTCAGCCAGAA
GGACAAGAAGATCCCAGCGGCACTTCCTCAGGTTCTCCAGCAGGCCTTGGTGGCCCAGCA
TGGCCCACTGAGGTCAACCATGACTGGCTGGCAGACACGTGCCACTGACCACCCAAAGTC
ACAACTCACCAGGAGGTGACCCCTCCCTCCTGCGGTCACCACTCGCCCGCCCCGCCCCAC
CCAGGAAAGTGCCTGCGCCGTCAGGGACACCATGTAGTAGGGCCGGCTGCGGCATCCAAT
GAGCTGCGATGGTTTTGTACACGACCCCCTTTCCCACAGCTGTCTGTCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               209-328, - strand, RNAz p=0.959078

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               209-328, - strand, RNAz p=0.959078

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               209-468, gnl|bosTau2|chr18 (14621306-14621559)
               

               
               209-468, gnl|Hg17|chr16 (66963794-66963545)
               

               
               209-468, gnl|Mm7|chr8 (104864982-104864734)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               209-468, gnl|bosTau2|chr18 (14621306-14621559)
               

               
               209-468, gnl|Hg17|chr16 (66963794-66963545)
               

               
               209-468, gnl|Mm7|chr8 (104864982-104864734)

	209-468, gnl\|bosTau2\|chr18 (14621306-14621559)
	209-468, gnl\|Hg17\|chr16 (66963794-66963545)
	209-468, gnl\|Mm7\|chr8 (104864982-104864734)