Pig1-112M17
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGCCAGCGAGGGGCTGGACTTCGCCGACGCGAATGGCCGTGGAGTGATGGTCACGGGTC TCCCGTACCCCCCACGCCTGGACCCCCGGGTGGTCCTCAAGATGCAGTTCCTGGATGAGA TGAGGGGCCAGGGCGGGGCCGCGGGCCAGTTCCTCTCCGGGCATGACTGGTACCGGCGGC AGGCGTCCAGGGCTGTGAACCAGGCCATCGGGCGGGTGATCCGGCATCGCCATGACTACG GGGCCGTCTTCCTCTGCGACCACAGGTTCGCCTATCCAGATGCCAGAGCCCAGCTGCCCT CCTGGGTGCGCCCACACGTCAAGGTGTATGACAGCTTTGGCCACGTCGTCCGAGACGTGG CCCAATTCTTCCGAGTTGCTCAGAAAACTATGTCGCTCCTGGCGCCCCGGGCTGCTGTCC CGGGTCTGGGCACAGAAGAGGGCTCTGCGGCAGTGGCCATGTCCCCCAGCCCCCTCCCCA CCAGGAAGGCCATGAGTCTCGACGTGCACGTCCCGAGCCTGAGACAGAGACACTCGGGCT CGCCAGTCACCGCGGATGCCGAGGGCAGCCTGTGCGTGGAGTATGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGCCAGCGAGGGGCTGGACTTCGCCGACGCGAATGGCCGTGGAGTGATGGTCACGGGTC TCCCGTACCCCCCACGCCTGGACCCCCGGGTGGTCCTCAAGATGCAGTTCCTGGATGAGA TGAGGGGCCAGGGCGGGGCCGCGGGCCAGTTCCTCTCCGGGCATGACTGGTACCGGCGGC AGGCGTCCAGGGCTGTGAACCAGGCCATCGGGCGGGTGATCCGGCATCGCCATGACTACG GGGCCGTCTTCCTCTGCGACCACAGGTTCGCCTATCCAGATGCCAGAGCCCAGCTGCCCT CCTGGGTGCGCCCACACGTCAAGGTGTATGACAGCTTTGGCCACGTCGTCCGAGACGTGG CCCAATTCTTCCGAGTTGCTCAGAAAACTATGTCGCTCCTGGCGCCCCGGGCTGCTGTCC CGGGTCTGGGCACAGAAGAGGGCTCTGCGGCAGTGGCCATGTCCCCCAGCCCCCTCCCCA CCAGGAAGGCCATGAGTCTCGACGTGCACGTCCCGAGCCTGAGACAGAGACACTCGGGCT CGCCAGTCACCGCGGATGCCGAGGGCAGCCTGTGCGTGGAGTATGAGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 32-149, + strand, RNAz p=0.56737 | |
| 32-149, + strand, RNAz p=0.851774 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 32-149, + strand, RNAz p=0.56737 | |
| 32-149, + strand, RNAz p=0.851774 |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 1-149, gnl|bosTau2|chr13 (35126244-35126096) | |
| 1-149, gnl|canFam2|chr24 (50289956-50290057) | |
| 1-149, gnl|danRer3|chr11 (7516286-7516186) | |
| 1-149, gnl|fr1|chrUn (249886447-249886552) | |
| 1-149, gnl|galGal2|chr20 (9323550-9323452) | |
| 1-149, gnl|hg17|chr20 (61791284-61791392) | |
| 1-149, gnl|Hg17|chr20 (61791297-61791445) | |
| 1-149, gnl|loxAfr1|scaffold_23627 (44367-44457) | |
| 1-149, gnl|mm7|chr2 (181851930-181852032) | |
| 1-149, gnl|Mm7|chr2 (181851937-181852085) | |
| 1-149, gnl|monDom2|scaffold_1 (184267553-184267663) | |
| 1-149, gnl|panTro1|chr21 (64853244-64853352) | |
| 1-149, gnl|rheMac2|chr10 (667226-667118) | |
| 1-149, gnl|rn3|chr3 (170397599-170397701) | |
| 1-149, gnl|tetNig1|chrUn_random (93812423-93812305) | |
| 1-149, gnl|xenTro1|scaffold_2047 (48453-48563) | |
| 263-392, gnl|bosTau2|chr13 (35125787-35125658) | |
| 263-392, gnl|canFam2|chr24 (50290520-50290670) | |
| 263-392, gnl|canFam2|chr24 (50290548-50290658) | |
| 263-392, gnl|danRer3|chr11 (7514525-7514391) | |
| 263-392, gnl|danRer3|chr11 (7514510-7514397) | |
| 263-392, gnl|echTel1|scaffold_244581 (93-247) | |
| 263-392, gnl|echTel1|scaffold_244581 (127-236) | |
| 263-392, gnl|fr1|chrUn (249886857-249886994) | |
| 263-392, gnl|fr1|chrUn (249886873-249886986) | |
| 263-392, gnl|galGal2|chr20 (9322048-9321913) | |
| 263-392, gnl|hg17|chr20 (61791870-61792018) | |
| 263-392, gnl|Hg17|chr20 (61791881-61792010) | |
| 263-392, gnl|hg17|chr4 (113637002-113637112) | |
| 263-392, gnl|loxAfr1|scaffold_205260 (500-657) | |
| 263-392, gnl|loxAfr1|scaffold_205260 (536-645) | |
| 263-392, gnl|mm7|chr2 (181852466-181852622) | |
| 263-392, gnl|mm7|chr2 (181852502-181852612) | |
| 263-392, gnl|Mm7|chr2 (181852485-181852614) | |
| 263-392, gnl|monDom2|scaffold_1 (184277292-184277439) | |
| 263-392, gnl|oryCun1|scaffold_153939 (27-180) | |
| 263-392, gnl|oryCun1|scaffold_153939 (60-170) | |
| 263-392, gnl|panTro1|chr21 (64853830-64853978) | |
| 263-392, gnl|panTro1|chr3 (130210259-130210366) | |
| 263-392, gnl|rheMac2|chr10 (666646-666498) | |
| 263-392, gnl|rheMac2|chr5 (105202960-105203067) | |
| 263-392, gnl|rn3|chr3 (170398137-170398280) | |
| 263-392, gnl|rn3|chr3 (170398160-170398270) | |
| 263-392, gnl|tetNig1|chrUn_random (93811996-93811859) | |
| 263-392, gnl|tetNig1|chrUn_random (93811979-93811876) | |
| 263-392, gnl|xenTro1|scaffold_2047 (49341-49481) | |
| 263-392, gnl|xenTro1|scaffold_2047 (49358-49461) | |
| 402-538, gnl|bosTau2|chr13 (35125560-35125424) | |
| 402-538, gnl|canFam2|chr24 (50290751-50290893) | |
| 402-538, gnl|echTel1|scaffold_244581 (318-466) | |
| 402-538, gnl|fr1|chrUn (249887003-249887138) | |
| 402-538, gnl|Hg17|chr20 (61792103-61792239) | |
| 402-538, gnl|hg17|chr4 (113637113-113637258) | |
| 402-538, gnl|loxAfr1|scaffold_205260 (771-916) | |
| 402-538, gnl|mm7|chr2 (181852716-181852861) | |
| 402-538, gnl|Mm7|chr2 (181852727-181852866) | |
| 402-538, gnl|oryCun1|scaffold_153939 (274-419) | |
| 402-538, gnl|panTro1|chr3 (130210367-130210512) | |
| 402-538, gnl|rheMac2|chr5 (105203068-105203213) | |
| 402-538, gnl|rn3|chr3 (170398377-170398522) | |
| 402-538, gnl|xenTro1|scaffold_2047 (49671-49779) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-149, gnl|bosTau2|chr13 (35126244-35126096) | |
| 1-149, gnl|canFam2|chr24 (50289956-50290057) | |
| 1-149, gnl|danRer3|chr11 (7516286-7516186) | |
| 1-149, gnl|fr1|chrUn (249886447-249886552) | |
| 1-149, gnl|galGal2|chr20 (9323550-9323452) | |
| 1-149, gnl|hg17|chr20 (61791284-61791392) | |
| 1-149, gnl|Hg17|chr20 (61791297-61791445) | |
| 1-149, gnl|loxAfr1|scaffold_23627 (44367-44457) | |
| 1-149, gnl|mm7|chr2 (181851930-181852032) | |
| 1-149, gnl|Mm7|chr2 (181851937-181852085) | |
| 1-149, gnl|monDom2|scaffold_1 (184267553-184267663) | |
| 1-149, gnl|panTro1|chr21 (64853244-64853352) | |
| 1-149, gnl|rheMac2|chr10 (667226-667118) | |
| 1-149, gnl|rn3|chr3 (170397599-170397701) | |
| 1-149, gnl|tetNig1|chrUn_random (93812423-93812305) | |
| 1-149, gnl|xenTro1|scaffold_2047 (48453-48563) | |
| 263-392, gnl|bosTau2|chr13 (35125787-35125658) | |
| 263-392, gnl|canFam2|chr24 (50290520-50290670) | |
| 263-392, gnl|canFam2|chr24 (50290548-50290658) | |
| 263-392, gnl|danRer3|chr11 (7514525-7514391) | |
| 263-392, gnl|danRer3|chr11 (7514510-7514397) | |
| 263-392, gnl|echTel1|scaffold_244581 (93-247) | |
| 263-392, gnl|echTel1|scaffold_244581 (127-236) | |
| 263-392, gnl|fr1|chrUn (249886857-249886994) | |
| 263-392, gnl|fr1|chrUn (249886873-249886986) | |
| 263-392, gnl|galGal2|chr20 (9322048-9321913) | |
| 263-392, gnl|hg17|chr20 (61791870-61792018) | |
| 263-392, gnl|Hg17|chr20 (61791881-61792010) | |
| 263-392, gnl|hg17|chr4 (113637002-113637112) | |
| 263-392, gnl|loxAfr1|scaffold_205260 (500-657) | |
| 263-392, gnl|loxAfr1|scaffold_205260 (536-645) | |
| 263-392, gnl|mm7|chr2 (181852466-181852622) | |
| 263-392, gnl|mm7|chr2 (181852502-181852612) | |
| 263-392, gnl|Mm7|chr2 (181852485-181852614) | |
| 263-392, gnl|monDom2|scaffold_1 (184277292-184277439) | |
| 263-392, gnl|oryCun1|scaffold_153939 (27-180) | |
| 263-392, gnl|oryCun1|scaffold_153939 (60-170) | |
| 263-392, gnl|panTro1|chr21 (64853830-64853978) | |
| 263-392, gnl|panTro1|chr3 (130210259-130210366) | |
| 263-392, gnl|rheMac2|chr10 (666646-666498) | |
| 263-392, gnl|rheMac2|chr5 (105202960-105203067) | |
| 263-392, gnl|rn3|chr3 (170398137-170398280) | |
| 263-392, gnl|rn3|chr3 (170398160-170398270) | |
| 263-392, gnl|tetNig1|chrUn_random (93811996-93811859) | |
| 263-392, gnl|tetNig1|chrUn_random (93811979-93811876) | |
| 263-392, gnl|xenTro1|scaffold_2047 (49341-49481) | |
| 263-392, gnl|xenTro1|scaffold_2047 (49358-49461) | |
| 402-538, gnl|bosTau2|chr13 (35125560-35125424) | |
| 402-538, gnl|canFam2|chr24 (50290751-50290893) | |
| 402-538, gnl|echTel1|scaffold_244581 (318-466) | |
| 402-538, gnl|fr1|chrUn (249887003-249887138) | |
| 402-538, gnl|Hg17|chr20 (61792103-61792239) | |
| 402-538, gnl|hg17|chr4 (113637113-113637258) | |
| 402-538, gnl|loxAfr1|scaffold_205260 (771-916) | |
| 402-538, gnl|mm7|chr2 (181852716-181852861) | |
| 402-538, gnl|Mm7|chr2 (181852727-181852866) | |
| 402-538, gnl|oryCun1|scaffold_153939 (274-419) | |
| 402-538, gnl|panTro1|chr3 (130210367-130210512) | |
| 402-538, gnl|rheMac2|chr5 (105203068-105203213) | |
| 402-538, gnl|rn3|chr3 (170398377-170398522) | |
| 402-538, gnl|xenTro1|scaffold_2047 (49671-49779) |