Pig1-112M18
|
CCGCCTGCTGAAGAGCTCCCACCCCGAGGACCTCCGAGCGGCCAACAAACTCATCAAGGA
GATGGTGCAGGAGGACCAGAAGCGGATGGAGAAGATCTCGAAGCGGGTGAGCGCCATCGA
GGAGGTGAACAACAACGTGAAGCTGCTGACGGAGATGGTCATGAACCACAGCCAGGGCGG
TGCCGCAGCCCGGAGCGGCGAGGACCTCATGAAGGAGCTGTACCAGCGCTGTGAGCGCAT
GCGGCCCACGCTCTTCAGACTGGCCAGCGACACCGAGGACAATGACGAGGCCCTGGCCGA
GATCCTGCAAGCCAACGACAACCTCACCCAGGTGATCAACCTGTACAGGCAGCTGGTGCG
GGGCGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGCCTGCTGAAGAGCTCCCACCCCGAGGACCTCCGAGCGGCCAACAAACTCATCAAGGA
GATGGTGCAGGAGGACCAGAAGCGGATGGAGAAGATCTCGAAGCGGGTGAGCGCCATCGA
GGAGGTGAACAACAACGTGAAGCTGCTGACGGAGATGGTCATGAACCACAGCCAGGGCGG
TGCCGCAGCCCGGAGCGGCGAGGACCTCATGAAGGAGCTGTACCAGCGCTGTGAGCGCAT
GCGGCCCACGCTCTTCAGACTGGCCAGCGACACCGAGGACAATGACGAGGCCCTGGCCGA
GATCCTGCAAGCCAACGACAACCTCACCCAGGTGATCAACCTGTACAGGCAGCTGGTGCG
GGGCGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
72-218, gnl|bosTau2|chr5 (67332900-67332754) |
|
72-218, gnl|canFam2|chr10 (30053921-30053797) |
|
72-218, gnl|danRer3|chr2 (45043539-45043408) |
|
72-218, gnl|dasNov1|scaffold_2296 (97640-97533) |
|
72-218, gnl|echTel1|scaffold_199346 (7519-7628) |
|
72-218, gnl|fr1|chrUn (167953865-167953751) |
|
72-218, gnl|galGal2|chr1 (47900601-47900465) |
|
72-218, gnl|hg17|chr22 (36343808-36343939) |
|
72-218, gnl|Hg17|chr22 (36343832-36343978) |
|
72-218, gnl|loxAfr1|scaffold_23968 (22241-22372) |
|
72-218, gnl|mm7|chr15 (78971033-78971168) |
|
72-218, gnl|Mm7|chr15 (78971061-78971204) |
|
72-218, gnl|monDom2|scaffold_34 (384408-384282) |
|
72-218, gnl|oryCun1|scaffold_183169 (16176-16306) |
|
72-218, gnl|panTro1|chr23 (36521753-36521884) |
|
72-218, gnl|rheMac2|chr10 (81535282-81535413) |
|
72-218, gnl|rn3|chr7 (116888089-116888224) |
|
72-218, gnl|tetNig1|chrUn_random (100782154-100782267) |
|
72-218, gnl|xenTro1|scaffold_632 (133458-133584) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-218, gnl|bosTau2|chr5 (67332900-67332754) |
|
72-218, gnl|canFam2|chr10 (30053921-30053797) |
|
72-218, gnl|danRer3|chr2 (45043539-45043408) |
|
72-218, gnl|dasNov1|scaffold_2296 (97640-97533) |
|
72-218, gnl|echTel1|scaffold_199346 (7519-7628) |
|
72-218, gnl|fr1|chrUn (167953865-167953751) |
|
72-218, gnl|galGal2|chr1 (47900601-47900465) |
|
72-218, gnl|hg17|chr22 (36343808-36343939) |
|
72-218, gnl|Hg17|chr22 (36343832-36343978) |
|
72-218, gnl|loxAfr1|scaffold_23968 (22241-22372) |
|
72-218, gnl|mm7|chr15 (78971033-78971168) |
|
72-218, gnl|Mm7|chr15 (78971061-78971204) |
|
72-218, gnl|monDom2|scaffold_34 (384408-384282) |
|
72-218, gnl|oryCun1|scaffold_183169 (16176-16306) |
|
72-218, gnl|panTro1|chr23 (36521753-36521884) |
|
72-218, gnl|rheMac2|chr10 (81535282-81535413) |
|
72-218, gnl|rn3|chr7 (116888089-116888224) |
|
72-218, gnl|tetNig1|chrUn_random (100782154-100782267) |
|
72-218, gnl|xenTro1|scaffold_632 (133458-133584) |
