Pig1-113A22
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGAGACAGGGTGGCGCTGGTGTTCCCCAACAACGACCCTGCTGCCTCCGTGGTGGCTTT CTACGGCTGCCTGCTGGCCGAGGTCGTTCCCGTGCCCATCGAGGTACCCCTCACGAGAAA GGACGCAGGAAGCCAGCAGATCGGGTTCCTGCTTGGAAGCTGTGGGGTGACCGTAGCCTT GACGAGTGACGCCTGCCACAAAGGGCTGCCCAAGAGCCCAACGGGGGAGATCCCGCAGTT CAAAGGTTGGCCCAAGCTGTTATGGTTTGTCACGGAGTCAAAACATCTCTCTAAACCGCC TCGAGACTGGTTCCCGCACATTAAGGATGCGAACAACGACACTGCGTATATCGAGTACAA GACGTGCAAGGATGGGAGTGTGCTCGGGGTCACCGTGACGAGGATCGCGCTTCTGACCCA CTGCCAGGCCCTCACCCAGGCCTGCGGCTACACAGAAGCTGAAACAATTGTGAATGTGTT GGATTTCAAGAAGGATGTCGGGCTGTGGCACGGAATCCTCACGAGCGTCATGAACATGAT GCACGTGATCAGCATCCCGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGAGACAGGGTGGCGCTGGTGTTCCCCAACAACGACCCTGCTGCCTCCGTGGTGGCTTT CTACGGCTGCCTGCTGGCCGAGGTCGTTCCCGTGCCCATCGAGGTACCCCTCACGAGAAA GGACGCAGGAAGCCAGCAGATCGGGTTCCTGCTTGGAAGCTGTGGGGTGACCGTAGCCTT GACGAGTGACGCCTGCCACAAAGGGCTGCCCAAGAGCCCAACGGGGGAGATCCCGCAGTT CAAAGGTTGGCCCAAGCTGTTATGGTTTGTCACGGAGTCAAAACATCTCTCTAAACCGCC TCGAGACTGGTTCCCGCACATTAAGGATGCGAACAACGACACTGCGTATATCGAGTACAA GACGTGCAAGGATGGGAGTGTGCTCGGGGTCACCGTGACGAGGATCGCGCTTCTGACCCA CTGCCAGGCCCTCACCCAGGCCTGCGGCTACACAGAAGCTGAAACAATTGTGAATGTGTT GGATTTCAAGAAGGATGTCGGGCTGTGGCACGGAATCCTCACGAGCGTCATGAACATGAT GCACGTGATCAGCATCCCGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 120-238, + strand, RNAz p=0.543004 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 120-238, + strand, RNAz p=0.543004 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 120-259, gnl|bosTau2|chr13 (30072683-30072544) | |
| 120-259, gnl|Hg17|chr10 (426805-426626) | |
| 120-259, gnl|Mm7|chr13 (9480659-9480791) | |
| 354-458, gnl|bosTau2|chr13 (30072068-30071964) | |
| 354-458, gnl|canFam2|chr2 (37236718-37236608) | |
| 354-458, gnl|danRer3|chr24 (25617413-25617522) | |
| 354-458, gnl|dasNov1|scaffold_7593 (39108-38998) | |
| 354-458, gnl|echTel1|scaffold_288880 (41127-41017) | |
| 354-458, gnl|fr1|chrUn (216370027-216369917) | |
| 354-458, gnl|galGal2|chr2 (9406017-9406127) | |
| 354-458, gnl|hg17|chr10 (425926-426036) | |
| 354-458, gnl|Hg17|chr10 (426035-425931) | |
| 354-458, gnl|loxAfr1|scaffold_35808 (5734-5624) | |
| 354-458, gnl|mm7|chr13 (9481530-9481420) | |
| 354-458, gnl|Mm7|chr13 (9481419-9481523) | |
| 354-458, gnl|monDom2|scaffold_7 (23419695-23419805) | |
| 354-458, gnl|oryCun1|scaffold_166900 (725-835) | |
| 354-458, gnl|panTro1|chr8 (459853-459963) | |
| 354-458, gnl|rheMac2|chr9 (339567-339677) | |
| 354-458, gnl|rn3|chr17 (71546612-71546722) | |
| 354-458, gnl|tetNig1|chrUn_random (132872984-132873090) | |
| 354-458, gnl|xenTro1|scaffold_378 (916411-916305) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 120-259, gnl|bosTau2|chr13 (30072683-30072544) | |
| 120-259, gnl|Hg17|chr10 (426805-426626) | |
| 120-259, gnl|Mm7|chr13 (9480659-9480791) | |
| 354-458, gnl|bosTau2|chr13 (30072068-30071964) | |
| 354-458, gnl|canFam2|chr2 (37236718-37236608) | |
| 354-458, gnl|danRer3|chr24 (25617413-25617522) | |
| 354-458, gnl|dasNov1|scaffold_7593 (39108-38998) | |
| 354-458, gnl|echTel1|scaffold_288880 (41127-41017) | |
| 354-458, gnl|fr1|chrUn (216370027-216369917) | |
| 354-458, gnl|galGal2|chr2 (9406017-9406127) | |
| 354-458, gnl|hg17|chr10 (425926-426036) | |
| 354-458, gnl|Hg17|chr10 (426035-425931) | |
| 354-458, gnl|loxAfr1|scaffold_35808 (5734-5624) | |
| 354-458, gnl|mm7|chr13 (9481530-9481420) | |
| 354-458, gnl|Mm7|chr13 (9481419-9481523) | |
| 354-458, gnl|monDom2|scaffold_7 (23419695-23419805) | |
| 354-458, gnl|oryCun1|scaffold_166900 (725-835) | |
| 354-458, gnl|panTro1|chr8 (459853-459963) | |
| 354-458, gnl|rheMac2|chr9 (339567-339677) | |
| 354-458, gnl|rn3|chr17 (71546612-71546722) | |
| 354-458, gnl|tetNig1|chrUn_random (132872984-132873090) | |
| 354-458, gnl|xenTro1|scaffold_378 (916411-916305) |