Non-Coding RNA Search

Pig1-113F11

Sequence:


               
               CGCCCGTGCTCTCCCCTGGCAACAAAGCCAAGCCTGATGACCACCGCTCGCGGCCCGGCA
GGACCGCAGACTTCGTGCTGCTCAAAGAGCGGACTCTGGACGAGGCCCCCCGGCCTCCCA
AGAAGGCCATGGACTACTCCTCATCCAGCGAGGAGGTGGAGAGCAGCGAGGACGATGAGG
AGGAGAGCAACGGCGAGCCTTCCCAGGGAGCAGGGACACCCCCGGGGGCCCGCGACGGCG
ACACCGACAGCGTCAGCACCATGGTGGTCCACGACGTGGAGGAGGTGGCCGGGACCCAAA
CTCCCTACGGGGGCGGCACCATGGTGGTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCCCGTGCTCTCCCCTGGCAACAAAGCCAAGCCTGATGACCACCGCTCGCGGCCCGGCA
GGACCGCAGACTTCGTGCTGCTCAAAGAGCGGACTCTGGACGAGGCCCCCCGGCCTCCCA
AGAAGGCCATGGACTACTCCTCATCCAGCGAGGAGGTGGAGAGCAGCGAGGACGATGAGG
AGGAGAGCAACGGCGAGCCTTCCCAGGGAGCAGGGACACCCCCGGGGGCCCGCGACGGCG
ACACCGACAGCGTCAGCACCATGGTGGTCCACGACGTGGAGGAGGTGGCCGGGACCCAAA
CTCCCTACGGGGGCGGCACCATGGTGGTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               64-220, + strand, RNAz p=0.987303

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               64-220, + strand, RNAz p=0.987303

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AL157418, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AL157418, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               64-245, gnl|bosTau2|chr19 (14792284-14792466)
               

               
               64-245, gnl|Hg17|chr17 (4737499-4737676)
               

               
               64-245, gnl|Mm7|chr11 (70691122-70691304)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               64-245, gnl|bosTau2|chr19 (14792284-14792466)
               

               
               64-245, gnl|Hg17|chr17 (4737499-4737676)
               

               
               64-245, gnl|Mm7|chr11 (70691122-70691304)

	64-245, gnl\|bosTau2\|chr19 (14792284-14792466)
	64-245, gnl\|Hg17\|chr17 (4737499-4737676)
	64-245, gnl\|Mm7\|chr11 (70691122-70691304)