Pig1-113L17
|
CAAATGTATACACATGTGCTGGCAAAAGACACACTCCTAGCCTTCATGTGAATGGCTCCC
TCACCCTGGCCATTGGTTCAATGAAGCCACTGGATTTCTTCCTCCTGAATGTCCAAGACC
AGGATGGCAGGGTCGAAGACCTCCTGTTCCACGTGGTGAGCGCGCCTACCAACGGTCAGC
TCGTGCTCTCACGGAATGGAAAAGAGGTTCAGCTCGACAAGGCTGGCCACTTCAGCTGGA
AAGACGTGAGGGAGAAAAAAGTGCGCTTTGTGCACAGCAAAGAAAAGCCCAGGAAAGGTT
ATTTTTCCCTGAAAATTAGTGACCAACAGTTCTTCTCTGAGCCACAGCTGATCAACATAC
AAGCATTTTCAACACAGGCCCCCTATGTGCTGAGAAATGAGGCCCTCCATGTTAACCGAG
GCCAGAGAGGAACCCTCACCACCCAGCTGCTTGACATCCGAGATGACGACAACCCACAGG
ACGTGGTGGTTGAAGTGCTCGATCCTCCACTTCATGGGCAGTTGCTCCAAACCCTTCAGT
CCCCTGCAGCCCCTATTTATCAATTCCGGCTGGATGAGCTCTCCAGGGGCCTTCTCCAGT
ATGTTCATGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CAAATGTATACACATGTGCTGGCAAAAGACACACTCCTAGCCTTCATGTGAATGGCTCCC
TCACCCTGGCCATTGGTTCAATGAAGCCACTGGATTTCTTCCTCCTGAATGTCCAAGACC
AGGATGGCAGGGTCGAAGACCTCCTGTTCCACGTGGTGAGCGCGCCTACCAACGGTCAGC
TCGTGCTCTCACGGAATGGAAAAGAGGTTCAGCTCGACAAGGCTGGCCACTTCAGCTGGA
AAGACGTGAGGGAGAAAAAAGTGCGCTTTGTGCACAGCAAAGAAAAGCCCAGGAAAGGTT
ATTTTTCCCTGAAAATTAGTGACCAACAGTTCTTCTCTGAGCCACAGCTGATCAACATAC
AAGCATTTTCAACACAGGCCCCCTATGTGCTGAGAAATGAGGCCCTCCATGTTAACCGAG
GCCAGAGAGGAACCCTCACCACCCAGCTGCTTGACATCCGAGATGACGACAACCCACAGG
ACGTGGTGGTTGAAGTGCTCGATCCTCCACTTCATGGGCAGTTGCTCCAAACCCTTCAGT
CCCCTGCAGCCCCTATTTATCAATTCCGGCTGGATGAGCTCTCCAGGGGCCTTCTCCAGT
ATGTTCATGAT
|
|
gi|61881265|ref|XP_601568.1| |
Protein identifier
|
gi|61881265|ref|XP_601568.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
21-293, gnl|bosTau2|chr6 (51048179-51047907) |
|
21-293, gnl|canFam2|chr32 (5788772-5789048) |
|
21-293, gnl|echTel1|scaffold_15782 (3450-3174) |
|
21-293, gnl|galGal2|chr4 (35280252-35279976) |
|
21-293, gnl|hg17|chr4 (79658058-79658334) |
|
21-293, gnl|Hg17|chr4 (79658058-79658330) |
|
21-293, gnl|loxAfr1|scaffold_11059 (31507-31785) |
|
21-293, gnl|mm7|chr5 (95863770-95864046) |
|
21-293, gnl|Mm7|chr5 (95863770-95864042) |
|
21-293, gnl|monDom2|scaffold_37 (23453602-23453326) |
|
21-293, gnl|oryCun1|scaffold_209867 (202670-202391) |
|
21-293, gnl|panTro1|chr3 (54071549-54071273) |
|
21-293, gnl|rheMac2|chr5 (51229460-51229184) |
|
21-293, gnl|rn3|chr14 (14447467-14447191) |
|
21-293, gnl|xenTro1|scaffold_122 (703287-703563) |
| |
|
373-611, gnl|bosTau2|chr6 (50975199-50974961) |
|
373-611, gnl|Hg17|chr4 (79665703-79665941) |
|
373-611, gnl|Mm7|chr5 (95870491-95870729) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
21-293, gnl|bosTau2|chr6 (51048179-51047907) |
|
21-293, gnl|canFam2|chr32 (5788772-5789048) |
|
21-293, gnl|echTel1|scaffold_15782 (3450-3174) |
|
21-293, gnl|galGal2|chr4 (35280252-35279976) |
|
21-293, gnl|hg17|chr4 (79658058-79658334) |
|
21-293, gnl|Hg17|chr4 (79658058-79658330) |
|
21-293, gnl|loxAfr1|scaffold_11059 (31507-31785) |
|
21-293, gnl|mm7|chr5 (95863770-95864046) |
|
21-293, gnl|Mm7|chr5 (95863770-95864042) |
|
21-293, gnl|monDom2|scaffold_37 (23453602-23453326) |
|
21-293, gnl|oryCun1|scaffold_209867 (202670-202391) |
|
21-293, gnl|panTro1|chr3 (54071549-54071273) |
|
21-293, gnl|rheMac2|chr5 (51229460-51229184) |
|
21-293, gnl|rn3|chr14 (14447467-14447191) |
|
21-293, gnl|xenTro1|scaffold_122 (703287-703563) |
| |
|
373-611, gnl|bosTau2|chr6 (50975199-50974961) |
|
373-611, gnl|Hg17|chr4 (79665703-79665941) |
|
373-611, gnl|Mm7|chr5 (95870491-95870729) |
