Non-Coding RNA Search

Pig1-114C17

Sequence:


               
               TCTTTTTTCTTTTTTTTTTGTCTTTTATTTTTGtagggccacacccatggcatatggagg
ttcccaggctaggggtctaattggagctatagttgctagcctacacaacagctcatagca
acgccagatccttaacccactcatggaagccagggattgaacccgcaacctcatggttcc
tagtcaaattcgtttccgctgagccaccaagggaactctgtggtgatatatttttaactc
aatatattgaacatgtaatttcaacatgtaatcaaaattaaaattattaatgagctattt
taTTTGCTTTCGTTTTTGAAATTCTTTGGGTATTCATACTTATAGGGCATCTCAAATTGG
CTTTGCCTTGTTTCAAGTGTTCAAAAGCCACATATGGCTAGTGGCTACCATATTGGATAT
GCATGTTTATACCATATGGAGACTCCTATTTTAAGTGATTATTCCTGCTAACTAGATGTA
AAATTTGGATTTTATAAGCTGTTCAGTGGGATACATGTATAGTCCTGTCATTATACTGAT
ACAAAAATTCTATCAGCTATGCAACTAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTTTTCTTTTTTTTTTGTCTTTTATTTTTGtagggccacacccatggcatatggagg
ttcccaggctaggggtctaattggagctatagttgctagcctacacaacagctcatagca
acgccagatccttaacccactcatggaagccagggattgaacccgcaacctcatggttcc
tagtcaaattcgtttccgctgagccaccaagggaactctgtggtgatatatttttaactc
aatatattgaacatgtaatttcaacatgtaatcaaaattaaaattattaatgagctattt
taTTTGCTTTCGTTTTTGAAATTCTTTGGGTATTCATACTTATAGGGCATCTCAAATTGG
CTTTGCCTTGTTTCAAGTGTTCAAAAGCCACATATGGCTAGTGGCTACCATATTGGATAT
GCATGTTTATACCATATGGAGACTCCTATTTTAAGTGATTATTCCTGCTAACTAGATGTA
AAATTTGGATTTTATAAGCTGTTCAGTGGGATACATGTATAGTCCTGTCATTATACTGAT
ACAAAAATTCTATCAGCTATGCAACTAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               332-447, - strand, RNAz p=0.72867

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               332-447, - strand, RNAz p=0.72867

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               253-569, gnl|bosTau2|chr23 (29303957-29303643)
               

               
               253-569, gnl|Hg17|chr6 (21798735-21799015)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               253-569, gnl|bosTau2|chr23 (29303957-29303643)
               

               
               253-569, gnl|Hg17|chr6 (21798735-21799015)

	253-569, gnl\|bosTau2\|chr23 (29303957-29303643)
	253-569, gnl\|Hg17\|chr6 (21798735-21799015)