Non-Coding RNA Search

Pig1-114F10

Sequence:


               
               GGACACACAGCTGTGGGTGTCTGCCCTGGGCTGGGTGCCCGGGGGGCTCATATGCTGCTG
CAGAATGAGCTGTTCCTAAACGTGGCCACCAAGGACTTCCCAGATGGAGAGCTGCGGGGG
CACGTGGCTGCCCTGCCCTACAGTGGGCACAGCGCCCGCCACGACACACTACCCGTGCCC
CTGGCAGGAGCCCTGGTGTTGCCCCCGGTGCAGAGCCAGGCAGCCGGGCACGCCTGGCTC
TCCCTGGATACCCACTGTCACCTACACTACGAAGTGCTGCTGGCTGGGCTTGGTGGCTCA
AAACAGGGCACCATCACTGCCCACCTCCTCGGGCCCCCTGGGATGCCAGGGCCCCGGCGG
TTGCTGAAGGGATTCTATGGCCCAGAGGCCCAGGGTGTGGTGAAGGATCTGGAGCCTGAG
CTGTTGCGGCACCTGGCACAGGGCACTGCTTCCCTGCTGATCACCACCAAGGGGAGCCCC
CAAGGGGAGCTGCGAGGGCAGGTGCACATCGCCAACCAGTGCGAGGTGGGCGGCCTGCGC
TTGGCCGCAGCAGGAACTGAGGAGGTGCAAGTACCTGGGGCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACACACAGCTGTGGGTGTCTGCCCTGGGCTGGGTGCCCGGGGGGCTCATATGCTGCTG
CAGAATGAGCTGTTCCTAAACGTGGCCACCAAGGACTTCCCAGATGGAGAGCTGCGGGGG
CACGTGGCTGCCCTGCCCTACAGTGGGCACAGCGCCCGCCACGACACACTACCCGTGCCC
CTGGCAGGAGCCCTGGTGTTGCCCCCGGTGCAGAGCCAGGCAGCCGGGCACGCCTGGCTC
TCCCTGGATACCCACTGTCACCTACACTACGAAGTGCTGCTGGCTGGGCTTGGTGGCTCA
AAACAGGGCACCATCACTGCCCACCTCCTCGGGCCCCCTGGGATGCCAGGGCCCCGGCGG
TTGCTGAAGGGATTCTATGGCCCAGAGGCCCAGGGTGTGGTGAAGGATCTGGAGCCTGAG
CTGTTGCGGCACCTGGCACAGGGCACTGCTTCCCTGCTGATCACCACCAAGGGGAGCCCC
CAAGGGGAGCTGCGAGGGCAGGTGCACATCGCCAACCAGTGCGAGGTGGGCGGCCTGCGC
TTGGCCGCAGCAGGAACTGAGGAGGTGCAAGTACCTGGGGCTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|25140444|gb|AAN71745.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|25140444|gb|AAN71745.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               10-166, gnl|bosTau2|chr1 (52128897-52128741)
               

               
               10-166, gnl|Hg17|chr3 (185585027-185585183)
               

               
               10-166, gnl|Mm7|chr16 (20285896-20286052)
               


               
               167-388, gnl|bosTau2|chr1 (52128408-52128187)
               

               
               167-388, gnl|Hg17|chr3 (185585508-185585729)
               

               
               167-388, gnl|Mm7|chr16 (20286329-20286550)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               10-166, gnl|bosTau2|chr1 (52128897-52128741)
               

               
               10-166, gnl|Hg17|chr3 (185585027-185585183)
               

               
               10-166, gnl|Mm7|chr16 (20285896-20286052)
               


               
               167-388, gnl|bosTau2|chr1 (52128408-52128187)
               

               
               167-388, gnl|Hg17|chr3 (185585508-185585729)
               

               
               167-388, gnl|Mm7|chr16 (20286329-20286550)

	10-166, gnl\|bosTau2\|chr1 (52128897-52128741)
	10-166, gnl\|Hg17\|chr3 (185585027-185585183)
	10-166, gnl\|Mm7\|chr16 (20285896-20286052)

	167-388, gnl\|bosTau2\|chr1 (52128408-52128187)
	167-388, gnl\|Hg17\|chr3 (185585508-185585729)
	167-388, gnl\|Mm7\|chr16 (20286329-20286550)