Pig1-117B18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAAAATGCAGTTATCATTCCAAGGGGTCGCAATTTTGATCAGCCTCATCGATTTTACGTA GCTGATGTGTACACTGATCTTACCCCACTGAGTAAATTTCCTTCCCCTGAGTATGAAACT TTTGCAGAATATTATAAAACGAAGTATAACCTTGACCTGACCAATCTCAACCAGCCGCTG CTGGATGTGGACCACACATCGTCAAGACTTAATCTTTTGACACCTCGCCATTTGAATCAG AAGGGGAAAGCTCTTCCTCTGAGCAGCGCTGAAAAGAGGAAAGCCAAATGGGAGAGTCTG CAGAACAAACAGATCCTGGTTCCGGAACTCTGTGCTATCCATCCAATTCCAGCATCACTG TGGAGAAAAGCAGTCTGTCTCCCCAGCATCCTTTATCGCCTTCACTGCCTTCTGACCGCG GAGGAGCTAAGAGCCCAGACGGCCAGCGATGCTGGTGTGGGAGTCAAATCACTTCCCGTG GATTTTAGATACCCCAACTTAGACTTCGGGTGGAAAAAATCCATCGACAGCAAATCTTTC ATCTCAGTTGCTAACTCCTCTTCAGCTGAAAACGAGAACTACTGTAAGCACAGCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAAAATGCAGTTATCATTCCAAGGGGTCGCAATTTTGATCAGCCTCATCGATTTTACGTA GCTGATGTGTACACTGATCTTACCCCACTGAGTAAATTTCCTTCCCCTGAGTATGAAACT TTTGCAGAATATTATAAAACGAAGTATAACCTTGACCTGACCAATCTCAACCAGCCGCTG CTGGATGTGGACCACACATCGTCAAGACTTAATCTTTTGACACCTCGCCATTTGAATCAG AAGGGGAAAGCTCTTCCTCTGAGCAGCGCTGAAAAGAGGAAAGCCAAATGGGAGAGTCTG CAGAACAAACAGATCCTGGTTCCGGAACTCTGTGCTATCCATCCAATTCCAGCATCACTG TGGAGAAAAGCAGTCTGTCTCCCCAGCATCCTTTATCGCCTTCACTGCCTTCTGACCGCG GAGGAGCTAAGAGCCCAGACGGCCAGCGATGCTGGTGTGGGAGTCAAATCACTTCCCGTG GATTTTAGATACCCCAACTTAGACTTCGGGTGGAAAAAATCCATCGACAGCAAATCTTTC ATCTCAGTTGCTAACTCCTCTTCAGCTGAAAACGAGAACTACTGTAAGCACAGCCC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 348-467, - strand, RNAz p=0.954184 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 348-467, - strand, RNAz p=0.954184 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 28-204, gnl|bosTau2|chr21 (39992076-39992252) | |
| 28-204, gnl|canFam2|chr8 (67029571-67029769) | |
| 28-204, gnl|danRer3|chr17 (20898233-20898035) | |
| 28-204, gnl|dasNov1|scaffold_7911 (42038-41843) | |
| 28-204, gnl|echTel1|scaffold_281089 (73302-73105) | |
| 28-204, gnl|fr1|chrUn (24857634-24857436) | |
| 28-204, gnl|galGal2|chr5 (42651746-42651944) | |
| 28-204, gnl|hg17|chr14 (94642129-94642327) | |
| 28-204, gnl|Hg17|chr14 (94642309-94642133) | |
| 28-204, gnl|loxAfr1|scaffold_856 (72034-71836) | |
| 28-204, gnl|mm7|chr12 (102199373-102199574) | |
| 28-204, gnl|Mm7|chr12 (102199553-102199377) | |
| 28-204, gnl|monDom2|scaffold_6 (73032223-73032421) | |
| 28-204, gnl|oryCun1|scaffold_213205 (89488-89290) | |
| 28-204, gnl|panTro1|chr15 (95080934-95081132) | |
| 28-204, gnl|rheMac2|chr7 (158345467-158345665) | |
| 28-204, gnl|rn3|chr6 (128796568-128796769) | |
| 28-204, gnl|tetNig1|chrUn_random (116376485-116376291) | |
| 28-204, gnl|xenTro1|scaffold_144 (1705665-1705467) | |
| 309-491, gnl|bosTau2|chr21 (39993131-39993313) | |
| 309-491, gnl|canFam2|chr8 (67028609-67028804) | |
| 309-491, gnl|danRer3|chr17 (20898787-20898593) | |
| 309-491, gnl|echTel1|scaffold_281089 (74280-74086) | |
| 309-491, gnl|fr1|chrUn (24858406-24858205) | |
| 309-491, gnl|galGal2|chr5 (42651045-42651222) | |
| 309-491, gnl|hg17|chr14 (94641158-94641353) | |
| 309-491, gnl|Hg17|chr14 (94641340-94641158) | |
| 309-491, gnl|loxAfr1|scaffold_856 (73132-72937) | |
| 309-491, gnl|mm7|chr12 (102198385-102198579) | |
| 309-491, gnl|Mm7|chr12 (102198567-102198385) | |
| 309-491, gnl|monDom2|scaffold_6 (73031545-73031740) | |
| 309-491, gnl|oryCun1|scaffold_213205 (90611-90413) | |
| 309-491, gnl|panTro1|chr15 (95079967-95080162) | |
| 309-491, gnl|rheMac2|chr7 (158344480-158344675) | |
| 309-491, gnl|rn3|chr6 (128795587-128795781) | |
| 309-491, gnl|tetNig1|chrUn_random (116378024-116377844) | |
| 309-491, gnl|xenTro1|scaffold_144 (1706658-1706461) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 28-204, gnl|bosTau2|chr21 (39992076-39992252) | |
| 28-204, gnl|canFam2|chr8 (67029571-67029769) | |
| 28-204, gnl|danRer3|chr17 (20898233-20898035) | |
| 28-204, gnl|dasNov1|scaffold_7911 (42038-41843) | |
| 28-204, gnl|echTel1|scaffold_281089 (73302-73105) | |
| 28-204, gnl|fr1|chrUn (24857634-24857436) | |
| 28-204, gnl|galGal2|chr5 (42651746-42651944) | |
| 28-204, gnl|hg17|chr14 (94642129-94642327) | |
| 28-204, gnl|Hg17|chr14 (94642309-94642133) | |
| 28-204, gnl|loxAfr1|scaffold_856 (72034-71836) | |
| 28-204, gnl|mm7|chr12 (102199373-102199574) | |
| 28-204, gnl|Mm7|chr12 (102199553-102199377) | |
| 28-204, gnl|monDom2|scaffold_6 (73032223-73032421) | |
| 28-204, gnl|oryCun1|scaffold_213205 (89488-89290) | |
| 28-204, gnl|panTro1|chr15 (95080934-95081132) | |
| 28-204, gnl|rheMac2|chr7 (158345467-158345665) | |
| 28-204, gnl|rn3|chr6 (128796568-128796769) | |
| 28-204, gnl|tetNig1|chrUn_random (116376485-116376291) | |
| 28-204, gnl|xenTro1|scaffold_144 (1705665-1705467) | |
| 309-491, gnl|bosTau2|chr21 (39993131-39993313) | |
| 309-491, gnl|canFam2|chr8 (67028609-67028804) | |
| 309-491, gnl|danRer3|chr17 (20898787-20898593) | |
| 309-491, gnl|echTel1|scaffold_281089 (74280-74086) | |
| 309-491, gnl|fr1|chrUn (24858406-24858205) | |
| 309-491, gnl|galGal2|chr5 (42651045-42651222) | |
| 309-491, gnl|hg17|chr14 (94641158-94641353) | |
| 309-491, gnl|Hg17|chr14 (94641340-94641158) | |
| 309-491, gnl|loxAfr1|scaffold_856 (73132-72937) | |
| 309-491, gnl|mm7|chr12 (102198385-102198579) | |
| 309-491, gnl|Mm7|chr12 (102198567-102198385) | |
| 309-491, gnl|monDom2|scaffold_6 (73031545-73031740) | |
| 309-491, gnl|oryCun1|scaffold_213205 (90611-90413) | |
| 309-491, gnl|panTro1|chr15 (95079967-95080162) | |
| 309-491, gnl|rheMac2|chr7 (158344480-158344675) | |
| 309-491, gnl|rn3|chr6 (128795587-128795781) | |
| 309-491, gnl|tetNig1|chrUn_random (116378024-116377844) | |
| 309-491, gnl|xenTro1|scaffold_144 (1706658-1706461) |