Non-Coding RNA Search

Pig1-117D10

Sequence:


               
               AACTGTGCTGAGTGAGAGCGGGGGGCGCCGGGAGTACCTCCCACAGCAGCAGCCCAGGGG
AGAGCCACCTTTCCAATGGGCTGGACCCAGTAGCAGAGACCGCGATTCGCCAGCTGACTG
AGCCCAGCGGGCGGGCAGCCAAAAAGACACCCACCAAGCGTAGCACACTCATCAGGGGTG
GGGGTTCCAAGGGGCCCATTGCTCAGGACGAGTTGGCACTGGCCCTGGGCTATGCGGCAT
CCCTGGAAGCCTCCATGCAGGAAGATGCAGGGACCAGCGGAGGCGCCTCCTCACCTCCCT
CAGACCCACCGGCCACGTCGCCGGGACCCCTCGATGCCCTCTCCAGTCCCACGAGTGTGC
AGGAAGCAGATGAGACGACACGTTCGGACATTTCTGAGAGGCCCTCTGTGGATGACGTAN
AGTCAGAAACGGGGTCTACTGGTGCCCTGGAAACCCGCAGCCTCAAAGATCACAAAGTGA
GCTTCCTGCGCAGCGGGACGAAGCTCATCTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACTGTGCTGAGTGAGAGCGGGGGGCGCCGGGAGTACCTCCCACAGCAGCAGCCCAGGGG
AGAGCCACCTTTCCAATGGGCTGGACCCAGTAGCAGAGACCGCGATTCGCCAGCTGACTG
AGCCCAGCGGGCGGGCAGCCAAAAAGACACCCACCAAGCGTAGCACACTCATCAGGGGTG
GGGGTTCCAAGGGGCCCATTGCTCAGGACGAGTTGGCACTGGCCCTGGGCTATGCGGCAT
CCCTGGAAGCCTCCATGCAGGAAGATGCAGGGACCAGCGGAGGCGCCTCCTCACCTCCCT
CAGACCCACCGGCCACGTCGCCGGGACCCCTCGATGCCCTCTCCAGTCCCACGAGTGTGC
AGGAAGCAGATGAGACGACACGTTCGGACATTTCTGAGAGGCCCTCTGTGGATGACGTAN
AGTCAGAAACGGGGTCTACTGGTGCCCTGGAAACCCGCAGCCTCAAAGATCACAAAGTGA
GCTTCCTGCGCAGCGGGACGAAGCTCATCTTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|33878010|gb|AAH21254.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|33878010|gb|AAH21254.2|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               190-308, - strand, RNAz p=0.767505

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               190-308, - strand, RNAz p=0.767505

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               190-477, gnl|bosTau2|chr15 (14302882-14303169)
               

               
               190-477, gnl|Hg17|chr11 (118489998-118490285)
               

               
               190-477, gnl|Mm7|chr9 (44248138-44247851)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               190-477, gnl|bosTau2|chr15 (14302882-14303169)
               

               
               190-477, gnl|Hg17|chr11 (118489998-118490285)
               

               
               190-477, gnl|Mm7|chr9 (44248138-44247851)

	190-477, gnl\|bosTau2\|chr15 (14302882-14303169)
	190-477, gnl\|Hg17\|chr11 (118489998-118490285)
	190-477, gnl\|Mm7\|chr9 (44248138-44247851)