Non-Coding RNA Search

Pig1-117D15

Sequence:


               
               TCCATGGCAATGGAGTACTTTGATGAAAAGATGTTCCAATTCTGAAGAGGAAATTACCAG
GATCAGATGTGTCTGGAAGACTCATGGGCTCTCCTCCAGTTCCAGGACCTTCTGCAGCCC
TGACAACAATGCAGCTCTTCTCCAAGCAAAACCCTTCAAGACAGGAGGTTACCAAGCTCC
AGCAGCAGGTTAAGACAAACGGTGCTGGGGTGACTGTTCTCAGGCGTGAAATTTCTGAGC
TTCGCACTAAAGTGCAAGAACAACAGAAACAGCTTCAAGACCAGGACCAGAAACTGCTAG
AGCAGACCCAGATCATAGGTGAGCAGAACGCACGGTTGGCAGAGCTGGAACGCAAACTAC
GAGAAGTAATGGAAAGTGCGGTGGGAAGCTCCTCAGGGTCTGGGCAGAATGAAGAGTCTC
CTCGGAAACGAAAAAAGGCCGCTGAAGCCATAGACTCTCTTAGGAAATCGAAACGCCTCC
GGAATAGGAAGTAAACCTCGCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCATGGCAATGGAGTACTTTGATGAAAAGATGTTCCAATTCTGAAGAGGAAATTACCAG
GATCAGATGTGTCTGGAAGACTCATGGGCTCTCCTCCAGTTCCAGGACCTTCTGCAGCCC
TGACAACAATGCAGCTCTTCTCCAAGCAAAACCCTTCAAGACAGGAGGTTACCAAGCTCC
AGCAGCAGGTTAAGACAAACGGTGCTGGGGTGACTGTTCTCAGGCGTGAAATTTCTGAGC
TTCGCACTAAAGTGCAAGAACAACAGAAACAGCTTCAAGACCAGGACCAGAAACTGCTAG
AGCAGACCCAGATCATAGGTGAGCAGAACGCACGGTTGGCAGAGCTGGAACGCAAACTAC
GAGAAGTAATGGAAAGTGCGGTGGGAAGCTCCTCAGGGTCTGGGCAGAATGAAGAGTCTC
CTCGGAAACGAAAAAAGGCCGCTGAAGCCATAGACTCTCTTAGGAAATCGAAACGCCTCC
GGAATAGGAAGTAAACCTCGCTC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q66L41_MOUSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q66L41_MOUSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               337-495, + strand, RNAz p=0.850325

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               337-495, + strand, RNAz p=0.850325

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               98-495, gnl|bosTau2|chr16 (14056810-14056413)
               

               
               98-495, gnl|Hg17|chr1 (220651787-220652184)
               

               
               98-495, gnl|Mm7|chr1 (182301256-182300859)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               98-495, gnl|bosTau2|chr16 (14056810-14056413)
               

               
               98-495, gnl|Hg17|chr1 (220651787-220652184)
               

               
               98-495, gnl|Mm7|chr1 (182301256-182300859)

	98-495, gnl\|bosTau2\|chr16 (14056810-14056413)
	98-495, gnl\|Hg17\|chr1 (220651787-220652184)
	98-495, gnl\|Mm7\|chr1 (182301256-182300859)