Non-Coding RNA Search

Pig1-118J16

Sequence:


               
               GCCATCTGTAGGGTATTGGCCCCACTGCATTTTCCTTTGTTGCTTTGGCCTCATTTCTAG
GTGCAGCCTGAAAATGTCCTCTCTCCCTTGTGTCTGCCTTGCTGAGTGGTGGTCCCCATG
GTTAGTCCATGGGCATGGTGAGAAACCAGGCAGACCCAGGGATGTGCTCCAGGTCTCAGA
TCAGGGGGAGCAGTATTGGGGAAGATAGGACTGGCAGTGGCTCCCTCGCAGCTCTTTCCT
GTGCGCTCTGTGTACCTGTGCACTCCTCTTGCTTCAGGTGCCTGTTTGTCCTTTTGTTCT
TCCTCCTCTAACATTACAGGTAACTTTTTAAAGCATAGACTATTTCTTTTCTCTTTTTTT
GGCCACAGCATGCAGTGGCTTTGTTGTGGGTTCTCAGTTCCCAGACCAGGGATTGAACCT
GGACCACAGCAGTGAAACTGCAGAGTCCTAACCACTGGATCACAAGGGAACTCCCAAAAC
ATAGGCtatttcttatagccattttgggatcacagcacaattgaggggaaggtacagaga
tttcccCGTGTAAACACAGCCTTCCCTTCCATCAACACCCCCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCATCTGTAGGGTATTGGCCCCACTGCATTTTCCTTTGTTGCTTTGGCCTCATTTCTAG
GTGCAGCCTGAAAATGTCCTCTCTCCCTTGTGTCTGCCTTGCTGAGTGGTGGTCCCCATG
GTTAGTCCATGGGCATGGTGAGAAACCAGGCAGACCCAGGGATGTGCTCCAGGTCTCAGA
TCAGGGGGAGCAGTATTGGGGAAGATAGGACTGGCAGTGGCTCCCTCGCAGCTCTTTCCT
GTGCGCTCTGTGTACCTGTGCACTCCTCTTGCTTCAGGTGCCTGTTTGTCCTTTTGTTCT
TCCTCCTCTAACATTACAGGTAACTTTTTAAAGCATAGACTATTTCTTTTCTCTTTTTTT
GGCCACAGCATGCAGTGGCTTTGTTGTGGGTTCTCAGTTCCCAGACCAGGGATTGAACCT
GGACCACAGCAGTGAAACTGCAGAGTCCTAACCACTGGATCACAAGGGAACTCCCAAAAC
ATAGGCtatttcttatagccattttgggatcacagcacaattgaggggaaggtacagaga
tttcccCGTGTAAACACAGCCTTCCCTTCCATCAACACCCCCACC

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               469-398, tRNA Glu : RF00005;tRNA; (AC150635.3/79787-79716), RaveNnA Score=34.72

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               469-398, tRNA Glu : RF00005;tRNA; (AC150635.3/79787-79716), RaveNnA Score=34.72