Pig1-119E23
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GTCAGAATAAGCCTTATTCAGCTTTGTTAAAGGCAACTAGGAGTAAAATGCTCCATTTGA
ACCCATTTTGCCCTTGTTTTTTCACTTTGTTAATGCAGCCCTGCTTAAATGAGTGCCTTT
ATTGGGTCGGTTAGAATATCTGAAACTATTAATTCTCTTGTATTGAATAGCTGGTGGCAG
GCCAGAGCAGATGGGGTAGGAAGGTATTTGGTTGGGTGTATTGCTTTCAATTAGGATCAA
TGAGGTTTCAGCTTCTTTGAATTAACTCACTTAATACCCACTGTGTGAAGTCAAGTCGTA
TCACCACAGCCTGCTAGAAGTGGGGGGAAAGTTGAGAAGACCTGTGGAAACTCTCCCTTC
ACCGGTATAGAGAGCTTTCCTTAACTGTAGACCGTTTCGGTAGACTGCTAGTCCCTACTG
GTAAGTCAGGTTTGAACAAAGGGGAAATCTGTACAGTAGGGATGGTGGTATTCTTCTTAT
TGTTTTGAATATATTTTAATTAAAAATGCGTTTCTTCATGGTAATACAGGACAGTGTTTT
GTACCAGAGAAAACTTTCACAGTACAAACTTTTTTTTCTGCACTCACCTACATAAATACA
TTCATCATGTTATTGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTCAGAATAAGCCTTATTCAGCTTTGTTAAAGGCAACTAGGAGTAAAATGCTCCATTTGA
ACCCATTTTGCCCTTGTTTTTTCACTTTGTTAATGCAGCCCTGCTTAAATGAGTGCCTTT
ATTGGGTCGGTTAGAATATCTGAAACTATTAATTCTCTTGTATTGAATAGCTGGTGGCAG
GCCAGAGCAGATGGGGTAGGAAGGTATTTGGTTGGGTGTATTGCTTTCAATTAGGATCAA
TGAGGTTTCAGCTTCTTTGAATTAACTCACTTAATACCCACTGTGTGAAGTCAAGTCGTA
TCACCACAGCCTGCTAGAAGTGGGGGGAAAGTTGAGAAGACCTGTGGAAACTCTCCCTTC
ACCGGTATAGAGAGCTTTCCTTAACTGTAGACCGTTTCGGTAGACTGCTAGTCCCTACTG
GTAAGTCAGGTTTGAACAAAGGGGAAATCTGTACAGTAGGGATGGTGGTATTCTTCTTAT
TGTTTTGAATATATTTTAATTAAAAATGCGTTTCTTCATGGTAATACAGGACAGTGTTTT
GTACCAGAGAAAACTTTCACAGTACAAACTTTTTTTTCTGCACTCACCTACATAAATACA
TTCATCATGTTATTGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-466, gnl|bosTau2|chr14 (45454255-45453780) |
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1-466, gnl|Hg17|chr8 (93147547-93147067) |
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1-466, gnl|Mm7|chr4 (13708684-13709171) |
| |
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475-616, gnl|bosTau2|chr14 (45453523-45453387) |
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475-616, gnl|canFam2|chr29 (40243297-40243464) |
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475-616, gnl|dasNov1|scaffold_14745 (39243-39403) |
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475-616, gnl|galGal2|chr2 (124467346-124467512) |
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475-616, gnl|hg17|chr8 (93146632-93146770) |
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475-616, gnl|Hg17|chr8 (93146793-93146659) |
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475-616, gnl|mm7|chr4 (13709594-13709446) |
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475-616, gnl|Mm7|chr4 (13709418-13709565) |
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475-616, gnl|monDom2|scaffold_3 (74259150-74258993) |
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475-616, gnl|oryCun1|scaffold_196141 (33602-33746) |
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475-616, gnl|panTro1|chr7 (95340696-95340836) |
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475-616, gnl|rheMac2|chr8 (94687451-94687590) |
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475-616, gnl|rn3|chr5 (28227996-28227845) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-466, gnl|bosTau2|chr14 (45454255-45453780) |
|
1-466, gnl|Hg17|chr8 (93147547-93147067) |
|
1-466, gnl|Mm7|chr4 (13708684-13709171) |
| |
|
475-616, gnl|bosTau2|chr14 (45453523-45453387) |
|
475-616, gnl|canFam2|chr29 (40243297-40243464) |
|
475-616, gnl|dasNov1|scaffold_14745 (39243-39403) |
|
475-616, gnl|galGal2|chr2 (124467346-124467512) |
|
475-616, gnl|hg17|chr8 (93146632-93146770) |
|
475-616, gnl|Hg17|chr8 (93146793-93146659) |
|
475-616, gnl|mm7|chr4 (13709594-13709446) |
|
475-616, gnl|Mm7|chr4 (13709418-13709565) |
|
475-616, gnl|monDom2|scaffold_3 (74259150-74258993) |
|
475-616, gnl|oryCun1|scaffold_196141 (33602-33746) |
|
475-616, gnl|panTro1|chr7 (95340696-95340836) |
|
475-616, gnl|rheMac2|chr8 (94687451-94687590) |
|
475-616, gnl|rn3|chr5 (28227996-28227845) |
