Non-Coding RNA Search

Pig1-119F10

Sequence:


               
               AACGCCTCAGATACCTCTTGCTTCCAGCTGAACGACTCCTCCTATGACAGCTTGGAAAAC
GAGCTGAATGAGGATGTTGATGCTCCGTGCAGCGACCTGGTGAAGAACCTTGGCCAGGGT
AGCAGAAGCATGGACTCCGTGCTGACCCTCAGTGACTATGACCTCGACCAGCCTGAGGGG
GAAGGCCTCTTAGCCCTGGGCGACTTTGACTTAGAGCGTTCTAAAGATGGAGACATCCGA
GTGGAGCAGCCTCTCGAATCCAAGCCCGTGACTGTGGTAGTGTACACAAGGGTCCCACGG
CAGGATCCTGCCGGGGCCCCCACCAGCCTGAGCACGCCCAGCCACCCGTCCACTGCCCCA
GGTGCTCCAAAGGGCCTGAGGCGACAACGGCGCTGCTCGGAGCCCAGCATTGACTATCTA
GACTCAAAGCTTTCCTATCTCAGGGAGTTTTATCAGAAAAAGCTGCGCAAGTCCAGCTGT
GATGCAATTCTCTCAAAAAAAGATGAGAACCATGTGAATCAGAATCGACCCCTCCAGGAA
GAGGGTGAGACACATTTTAAACCAAGTTTAGTCACAGGCACTAATACCAAGAAGAATGCC
ACTAATAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACGCCTCAGATACCTCTTGCTTCCAGCTGAACGACTCCTCCTATGACAGCTTGGAAAAC
GAGCTGAATGAGGATGTTGATGCTCCGTGCAGCGACCTGGTGAAGAACCTTGGCCAGGGT
AGCAGAAGCATGGACTCCGTGCTGACCCTCAGTGACTATGACCTCGACCAGCCTGAGGGG
GAAGGCCTCTTAGCCCTGGGCGACTTTGACTTAGAGCGTTCTAAAGATGGAGACATCCGA
GTGGAGCAGCCTCTCGAATCCAAGCCCGTGACTGTGGTAGTGTACACAAGGGTCCCACGG
CAGGATCCTGCCGGGGCCCCCACCAGCCTGAGCACGCCCAGCCACCCGTCCACTGCCCCA
GGTGCTCCAAAGGGCCTGAGGCGACAACGGCGCTGCTCGGAGCCCAGCATTGACTATCTA
GACTCAAAGCTTTCCTATCTCAGGGAGTTTTATCAGAAAAAGCTGCGCAAGTCCAGCTGT
GATGCAATTCTCTCAAAAAAAGATGAGAACCATGTGAATCAGAATCGACCCCTCCAGGAA
GAGGGTGAGACACATTTTAAACCAAGTTTAGTCACAGGCACTAATACCAAGAAGAATGCC
ACTAATAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|11611595|dbj|BAB18980.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|11611595|dbj|BAB18980.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               47-166, + strand, RNAz p=0.535033

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               47-166, + strand, RNAz p=0.535033

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               8-609, gnl|bosTau2|chr15 (7905644-7905049)
               

               
               8-609, gnl|Hg17|chr11 (109957162-109956555)
               

               
               8-609, gnl|Mm7|chr9 (51826938-51827548)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               8-609, gnl|bosTau2|chr15 (7905644-7905049)
               

               
               8-609, gnl|Hg17|chr11 (109957162-109956555)
               

               
               8-609, gnl|Mm7|chr9 (51826938-51827548)

	8-609, gnl\|bosTau2\|chr15 (7905644-7905049)
	8-609, gnl\|Hg17\|chr11 (109957162-109956555)
	8-609, gnl\|Mm7\|chr9 (51826938-51827548)