Pig1-119G04
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCTTCCTGCGACGCGAGCGCCTCAGCCGCTTCCTGAATCCAGACGAGGTGATTGCAGTGG TGATGGATGTTTTCACCGACATCGACATCTTCCGAGACCTGCAGGAGATCTCTCGGAAAC AGGGAGTTGCTGTCTACATCCTTCTGGACCAGGCTCTGCTCTCTCAGTTTTTGGATATGT GCATGGATCTGAAGGTTCATCCTGAGCAGGAAAAGCTGATGACAGTTCGGACGATTACAG GAAATATTTACTACGCAAGATCAGGAACTAAAATTATTGGGAAGGTTCATGAAAAGTTCA CACTGATTGATGGCATCCGTGTGGCCACAGGCTCCTACAGTTTCACCTGGACAGATGGCA AATTAAACAGCAGCAACTTGGTCATTCTGTCTGGCCAAGTGGTCGAACACTTTGAGCCTG GAGTTCCGGATCCTGTACGCACAGTCAGAGCCCATCAGCGCCAAACTCCTGTCCAACTTC CAGATCAGTGGCAAGTTTGACCACCTCATTGACCAGAAACCACCGTCCAAGGAGCTCACA CTGGGCAACCTGCTGCGGCTGCGGCTGGCCAGGCTCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCTTCCTGCGACGCGAGCGCCTCAGCCGCTTCCTGAATCCAGACGAGGTGATTGCAGTGG TGATGGATGTTTTCACCGACATCGACATCTTCCGAGACCTGCAGGAGATCTCTCGGAAAC AGGGAGTTGCTGTCTACATCCTTCTGGACCAGGCTCTGCTCTCTCAGTTTTTGGATATGT GCATGGATCTGAAGGTTCATCCTGAGCAGGAAAAGCTGATGACAGTTCGGACGATTACAG GAAATATTTACTACGCAAGATCAGGAACTAAAATTATTGGGAAGGTTCATGAAAAGTTCA CACTGATTGATGGCATCCGTGTGGCCACAGGCTCCTACAGTTTCACCTGGACAGATGGCA AATTAAACAGCAGCAACTTGGTCATTCTGTCTGGCCAAGTGGTCGAACACTTTGAGCCTG GAGTTCCGGATCCTGTACGCACAGTCAGAGCCCATCAGCGCCAAACTCCTGTCCAACTTC CAGATCAGTGGCAAGTTTGACCACCTCATTGACCAGAAACCACCGTCCAAGGAGCTCACA CTGGGCAACCTGCTGCGGCTGCGGCTGGCCAGGCTCTC |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 441-557, - strand, RNAz p=0.925842 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 441-557, - strand, RNAz p=0.925842 |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 46-215, gnl|bosTau2|chr20 (23192113-23192282) | |
| 46-215, gnl|canFam2|chr24 (30285409-30285606) | |
| 46-215, gnl|danRer3|chr11 (25536527-25536696) | |
| 46-215, gnl|dasNov1|scaffold_2076 (89600-89402) | |
| 46-215, gnl|echTel1|scaffold_209653 (12730-12532) | |
| 46-215, gnl|fr1|chrUn (4113931-4114118) | |
| 46-215, gnl|galGal2|chr20 (3641803-3642001) | |
| 46-215, gnl|hg17|chr20 (37004005-37004202) | |
| 46-215, gnl|Hg17|chr20 (37004014-37004183) | |
| 46-215, gnl|loxAfr1|scaffold_51096 (13969-14167) | |
| 46-215, gnl|mm7|chr2 (158520723-158520921) | |
| 46-215, gnl|Mm7|chr2 (158520733-158520902) | |
| 46-215, gnl|monDom2|scaffold_6 (3375688-3375891) | |
| 46-215, gnl|oryCun1|scaffold_133731 (16708-16904) | |
| 46-215, gnl|panTro1|chr21 (39385717-39385914) | |
| 46-215, gnl|rheMac2|chr10 (25504833-25504636) | |
| 46-215, gnl|rn3|chr3 (149422512-149422710) | |
| 46-215, gnl|tetNig1|chr11 (9228748-9228936) | |
| 46-215, gnl|xenTro1|scaffold_35 (601605-601786) | |
| 333-578, gnl|bosTau2|chr20 (23200264-23200508) | |
| 333-578, gnl|canFam2|chr24 (30293030-30293188) | |
| 333-578, gnl|danRer3|chr11 (25540703-25540853) | |
| 333-578, gnl|echTel1|scaffold_209653 (5382-5228) | |
| 333-578, gnl|fr1|chrUn (4114456-4114596) | |
| 333-578, gnl|galGal2|chrUn (50293941-50294090) | |
| 333-578, gnl|hg17|chr20 (37013585-37013739) | |
| 333-578, gnl|Hg17|chr20 (37013588-37013832) | |
| 333-578, gnl|mm7|chr2 (158526039-158526193) | |
| 333-578, gnl|Mm7|chr2 (158526042-158526286) | |
| 333-578, gnl|monDom2|scaffold_6 (3381737-3381890) | |
| 333-578, gnl|oryCun1|scaffold_133731 (24714-24868) | |
| 333-578, gnl|panTro1|chr21 (39395909-39396063) | |
| 333-578, gnl|rheMac2|chr10 (25495604-25495450) | |
| 333-578, gnl|rn3|chr3 (149427993-149428147) | |
| 333-578, gnl|tetNig1|chr11 (9229265-9229417) | |
| 333-578, gnl|xenTro1|scaffold_35 (603639-603790) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 46-215, gnl|bosTau2|chr20 (23192113-23192282) | |
| 46-215, gnl|canFam2|chr24 (30285409-30285606) | |
| 46-215, gnl|danRer3|chr11 (25536527-25536696) | |
| 46-215, gnl|dasNov1|scaffold_2076 (89600-89402) | |
| 46-215, gnl|echTel1|scaffold_209653 (12730-12532) | |
| 46-215, gnl|fr1|chrUn (4113931-4114118) | |
| 46-215, gnl|galGal2|chr20 (3641803-3642001) | |
| 46-215, gnl|hg17|chr20 (37004005-37004202) | |
| 46-215, gnl|Hg17|chr20 (37004014-37004183) | |
| 46-215, gnl|loxAfr1|scaffold_51096 (13969-14167) | |
| 46-215, gnl|mm7|chr2 (158520723-158520921) | |
| 46-215, gnl|Mm7|chr2 (158520733-158520902) | |
| 46-215, gnl|monDom2|scaffold_6 (3375688-3375891) | |
| 46-215, gnl|oryCun1|scaffold_133731 (16708-16904) | |
| 46-215, gnl|panTro1|chr21 (39385717-39385914) | |
| 46-215, gnl|rheMac2|chr10 (25504833-25504636) | |
| 46-215, gnl|rn3|chr3 (149422512-149422710) | |
| 46-215, gnl|tetNig1|chr11 (9228748-9228936) | |
| 46-215, gnl|xenTro1|scaffold_35 (601605-601786) | |
| 333-578, gnl|bosTau2|chr20 (23200264-23200508) | |
| 333-578, gnl|canFam2|chr24 (30293030-30293188) | |
| 333-578, gnl|danRer3|chr11 (25540703-25540853) | |
| 333-578, gnl|echTel1|scaffold_209653 (5382-5228) | |
| 333-578, gnl|fr1|chrUn (4114456-4114596) | |
| 333-578, gnl|galGal2|chrUn (50293941-50294090) | |
| 333-578, gnl|hg17|chr20 (37013585-37013739) | |
| 333-578, gnl|Hg17|chr20 (37013588-37013832) | |
| 333-578, gnl|mm7|chr2 (158526039-158526193) | |
| 333-578, gnl|Mm7|chr2 (158526042-158526286) | |
| 333-578, gnl|monDom2|scaffold_6 (3381737-3381890) | |
| 333-578, gnl|oryCun1|scaffold_133731 (24714-24868) | |
| 333-578, gnl|panTro1|chr21 (39395909-39396063) | |
| 333-578, gnl|rheMac2|chr10 (25495604-25495450) | |
| 333-578, gnl|rn3|chr3 (149427993-149428147) | |
| 333-578, gnl|tetNig1|chr11 (9229265-9229417) | |
| 333-578, gnl|xenTro1|scaffold_35 (603639-603790) |