Non-Coding RNA Search

Pig1-121B20

Sequence:


               
               GACCTACTTCAAATAAAACAGTAAAGTACAGTCTTAGATATAGATCAGAAATGTGGATAA
CTAGAGCAGCATTCTCGTCCCTTGGGGACTTGTTGCATTTGGGGAAACAGGCTAAAGCTG
GAGAAGGTGAGTCTAAAGGGACTGCTTCCTTGATAAATAACCTTTGAGGTATATGGAAGG
TGCTTCGAAGTTCCCAGAATTTATACAATTTCTAGAGTTAAACTTCATTAAAGCACTTAA
CTCAAATTATGGAATAAATAGATTTTTATTTTATTTTGGTGTTCTGTGTGAAAGATAAAG
ACAGATGAAGGTAGTATTTTTGGGTCGATGATGAGCTGGCATGTATTCTGAATCTAAAGT
TGATTAGTACTACTTTAGCTCTAGAATTACTCTGAGACCTGAAAAATACTTGGATCTTTA
TGAAGGACTTTAGTGCCTTGGTTTTTCTTGGCCAGATAATTTTAAATTGAAAGTTTTCAT
TTGGCAACACGAAATAAAAAGTTCAGATGTATATTGAACACATGCCCTGGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACCTACTTCAAATAAAACAGTAAAGTACAGTCTTAGATATAGATCAGAAATGTGGATAA
CTAGAGCAGCATTCTCGTCCCTTGGGGACTTGTTGCATTTGGGGAAACAGGCTAAAGCTG
GAGAAGGTGAGTCTAAAGGGACTGCTTCCTTGATAAATAACCTTTGAGGTATATGGAAGG
TGCTTCGAAGTTCCCAGAATTTATACAATTTCTAGAGTTAAACTTCATTAAAGCACTTAA
CTCAAATTATGGAATAAATAGATTTTTATTTTATTTTGGTGTTCTGTGTGAAAGATAAAG
ACAGATGAAGGTAGTATTTTTGGGTCGATGATGAGCTGGCATGTATTCTGAATCTAAAGT
TGATTAGTACTACTTTAGCTCTAGAATTACTCTGAGACCTGAAAAATACTTGGATCTTTA
TGAAGGACTTTAGTGCCTTGGTTTTTCTTGGCCAGATAATTTTAAATTGAAAGTTTTCAT
TTGGCAACACGAAATAAAAAGTTCAGATGTATATTGAACACATGCCCTGGGGAG

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               323-400, RF00279;U45; (BC057661.1/108-186) : MBII-401 (gnl|combinedlit|LIT1179), 
RaveNnA Score=57.51

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               323-400, RF00279;U45; (BC057661.1/108-186) : MBII-401 (gnl|combinedlit|LIT1179), 
RaveNnA Score=57.51