Non-Coding RNA Search

Pig1-125C23

Sequence:


               
               AAAATAGTTTCAAAAAATAAGGAAGATGAGAATCAAGATTAAAGAAACAATTCGGAGAAG
TTAGCAGTCTCTCCATTCAACTTTCCCTTGTTTCTTCTGTAACTTCCCCATCTCCCTCTC
CCAACCCACCCTGACTCTATGCTTCTAGGAATAGGAGTTGGAACTGGCATTTATACTTGT
GCTTTGTGGGCATGTCCTGAGAAACTACATTTGTGGCATTCCTGATGCCATTGAAAAATG
AAATGAGGGAGCATTTGTCAGATTAGGGTTCAGTGTGCCTGAGCCTGACTGTTTAGCATC
AGGCAGTTCAAGACCAACAAAAATAAAGCAGTGTCCCTGCATTGAGAAGCAAGCCATGAT
CACGTGGCATACCCAGCACAGCAAACAAGGGCCATCACAGATGCAGTCTCTGTAGAGAGA
GGAGTAGCTGTCCCTTTCCAGCTGTGCATACCCTTCCTTTGCAACCAGAGTCCAGTAACC
ATGACCAGCAGTGGTAAGTAAGCTGCGTAGCATGATGTGACTTAGTTCATTCCATAAGTA
GATGGAATGTATGAATGTGTGTGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAATAGTTTCAAAAAATAAGGAAGATGAGAATCAAGATTAAAGAAACAATTCGGAGAAG
TTAGCAGTCTCTCCATTCAACTTTCCCTTGTTTCTTCTGTAACTTCCCCATCTCCCTCTC
CCAACCCACCCTGACTCTATGCTTCTAGGAATAGGAGTTGGAACTGGCATTTATACTTGT
GCTTTGTGGGCATGTCCTGAGAAACTACATTTGTGGCATTCCTGATGCCATTGAAAAATG
AAATGAGGGAGCATTTGTCAGATTAGGGTTCAGTGTGCCTGAGCCTGACTGTTTAGCATC
AGGCAGTTCAAGACCAACAAAAATAAAGCAGTGTCCCTGCATTGAGAAGCAAGCCATGAT
CACGTGGCATACCCAGCACAGCAAACAAGGGCCATCACAGATGCAGTCTCTGTAGAGAGA
GGAGTAGCTGTCCCTTTCCAGCTGTGCATACCCTTCCTTTGCAACCAGAGTCCAGTAACC
ATGACCAGCAGTGGTAAGTAAGCTGCGTAGCATGATGTGACTTAGTTCATTCCATAAGTA
GATGGAATGTATGAATGTGTGTGTGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               192-303, + strand, RNAz p=0.626875

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               192-303, + strand, RNAz p=0.626875

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               13-562, gnl|bosTau2|chr14 (27255938-27256484)
               

               
               13-562, gnl|Hg17|chr8 (119407207-119406337)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-562, gnl|bosTau2|chr14 (27255938-27256484)
               

               
               13-562, gnl|Hg17|chr8 (119407207-119406337)

	13-562, gnl\|bosTau2\|chr14 (27255938-27256484)
	13-562, gnl\|Hg17\|chr8 (119407207-119406337)