Non-Coding RNA Search

Pig1-125M05

Sequence:


               
               GTAGTAATGTACATATGGGTGATTGTAAAAATTAAAGGACAAGTACCAAGCGTAGGCTGT
GTCGTAGAATATGTACTCAGTAAAAACAGGTATCCGTTCATCATTTTCTGCTATTGAACT
CTAAGGTAAAGTTTATATCATATACATTAGATTCTTATAAACTAGACTTGAAAAGAATCT
GAAGTTTAACATACAGAAGAAAGCACAGGATGATTCCTGCTCTATAGTTTGTAGCAATAA
CACATGACTGTTTTCTGAAGGCTCTATTAATTGTAAGAAATAGCAACCCACTAAAGTGAA
TTCAGTCAAAGTGGACTTAGTGTAAAGATTCAGATAATTGCATTTTGATTACCCAGAAAC
TGGAATGTAAGATGTAAAGGCTATATTTGTTTTGTTGTGCTAGAGCAACATGTTCCCGCT
CCTCTCTGTGGTCTGGGCTCCATCCTTTCATCCCCGACTGATTTTCCTCACTTCCTCATC
TTCCATGTGATTCGCATTGGCTGTGAGCCCCTACACCCCCTTGCTCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTAGTAATGTACATATGGGTGATTGTAAAAATTAAAGGACAAGTACCAAGCGTAGGCTGT
GTCGTAGAATATGTACTCAGTAAAAACAGGTATCCGTTCATCATTTTCTGCTATTGAACT
CTAAGGTAAAGTTTATATCATATACATTAGATTCTTATAAACTAGACTTGAAAAGAATCT
GAAGTTTAACATACAGAAGAAAGCACAGGATGATTCCTGCTCTATAGTTTGTAGCAATAA
CACATGACTGTTTTCTGAAGGCTCTATTAATTGTAAGAAATAGCAACCCACTAAAGTGAA
TTCAGTCAAAGTGGACTTAGTGTAAAGATTCAGATAATTGCATTTTGATTACCCAGAAAC
TGGAATGTAAGATGTAAAGGCTATATTTGTTTTGTTGTGCTAGAGCAACATGTTCCCGCT
CCTCTCTGTGGTCTGGGCTCCATCCTTTCATCCCCGACTGATTTTCCTCACTTCCTCATC
TTCCATGTGATTCGCATTGGCTGTGAGCCCCTACACCCCCTTGCTCAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               343-524, - strand, RNAz p=0.619887

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               343-524, - strand, RNAz p=0.619887

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               41-524, gnl|bosTau2|chr9 (41809006-41809485)
               

               
               41-524, gnl|Hg17|chr6 (133800370-133801281)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               41-524, gnl|bosTau2|chr9 (41809006-41809485)
               

               
               41-524, gnl|Hg17|chr6 (133800370-133801281)

	41-524, gnl\|bosTau2\|chr9 (41809006-41809485)
	41-524, gnl\|Hg17\|chr6 (133800370-133801281)