Non-Coding RNA Search

Pig1-125M22

Sequence:


               
               TCCTGGCGAGGCCTTGCCGCCTGTTGTGCAAGGAGGTGCTGAAAAGGCCTCCGAGCTGCC
ACCAAGAAGTGGGCCTGAGCCTGCAGCCCCTGGCCCCTTCTCCCCAGCCTCCCCGCCTGG
CTCACCTGACTGGCCTCAGGAGAGGAGCCCGGGGGGCCGCTCAGAGAGTGCCAGTCCAAG
GGGCCCTGTGCCCACCACACTGCCCGGCCTCCGCCACGCCCCCTGGCAGGGCCTTCGAGA
CCCCCCGGACAGCCCAGATGGGTCCCCCCTCACCCCTGTGCCTACTCAGATGCCCTGGCT
TGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCCTGGCGAGGCCTTGCCGCCTGTTGTGCAAGGAGGTGCTGAAAAGGCCTCCGAGCTGCC
ACCAAGAAGTGGGCCTGAGCCTGCAGCCCCTGGCCCCTTCTCCCCAGCCTCCCCGCCTGG
CTCACCTGACTGGCCTCAGGAGAGGAGCCCGGGGGGCCGCTCAGAGAGTGCCAGTCCAAG
GGGCCCTGTGCCCACCACACTGCCCGGCCTCCGCCACGCCCCCTGGCAGGGCCTTCGAGA
CCCCCCGGACAGCCCAGATGGGTCCCCCCTCACCCCTGTGCCTACTCAGATGCCCTGGCT
TGTG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               40-156, - strand, RNAz p=0.939967

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-156, - strand, RNAz p=0.939967

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               67-289, - strand, RNAmicro p=0.999456

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               67-289, - strand, RNAmicro p=0.999456

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-304, gnl|bosTau2|chr5 (20512149-20512455)
               

               
               1-304, gnl|Hg17|chr12 (51740780-51741086)
               

               
               1-304, gnl|Mm7|chr15 (102098881-102099187)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-304, gnl|bosTau2|chr5 (20512149-20512455)
               

               
               1-304, gnl|Hg17|chr12 (51740780-51741086)
               

               
               1-304, gnl|Mm7|chr15 (102098881-102099187)

	1-304, gnl\|bosTau2\|chr5 (20512149-20512455)
	1-304, gnl\|Hg17\|chr12 (51740780-51741086)
	1-304, gnl\|Mm7\|chr15 (102098881-102099187)