Non-Coding RNA Search

Pig1-125N07

Sequence:


               
               GGTGTTCGGTGAGGGAACTGAGGCTGTAAAGAAATCTTTAGAAGGAATATTTGATGACAC
TGTTCCAGATGGCAAGAGGGAGAAAGAAATGGTCTTACCCAGCGTCCACCAGCACAACCC
TGACTGTGACATTTGGGTCCACGAGTATTTCACTCCATCCTGGTTCTGCCTGCCCAATAA
CCAGCCAGCGTTGACGGTCGTGCGGCCAGGGGACACTGCCCGGGACACCCTGGAACTGAT
CTGCAAGACCCATCAACTGGATCACTCTGCTCATTACCTGCGCCTGAAATTTCTGATAGA
AAACAAAATGCAGCACTACGTGCCAAAGCCCGAGGAGGACATTTACGAGCTGCTGTACAA
AGAAATTGAAATTTGTCCAAAAGTCACTCAGAACATCCAGATTGAGAAGTCAGATGCGGC
CGGTGATAATTACGGCTTTTCACTTTCTTCTGTGGAAGAAGATGGTATCCGAAGGCTCTA
TGTGAACAGTGTAAAGGAAACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGTTCGGTGAGGGAACTGAGGCTGTAAAGAAATCTTTAGAAGGAATATTTGATGACAC
TGTTCCAGATGGCAAGAGGGAGAAAGAAATGGTCTTACCCAGCGTCCACCAGCACAACCC
TGACTGTGACATTTGGGTCCACGAGTATTTCACTCCATCCTGGTTCTGCCTGCCCAATAA
CCAGCCAGCGTTGACGGTCGTGCGGCCAGGGGACACTGCCCGGGACACCCTGGAACTGAT
CTGCAAGACCCATCAACTGGATCACTCTGCTCATTACCTGCGCCTGAAATTTCTGATAGA
AAACAAAATGCAGCACTACGTGCCAAAGCCCGAGGAGGACATTTACGAGCTGCTGTACAA
AGAAATTGAAATTTGTCCAAAAGTCACTCAGAACATCCAGATTGAGAAGTCAGATGCGGC
CGGTGATAATTACGGCTTTTCACTTTCTTCTGTGGAAGAAGATGGTATCCGAAGGCTCTA
TGTGAACAGTGTAAAGGAAACT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|61848016|ref|XP_600518.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61848016|ref|XP_600518.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               75-247, gnl|bosTau2|chr1 (3840867-3841039)
               

               
               75-247, gnl|Hg17|chr21 (31504404-31504232)
               

               
               75-247, gnl|Mm7|chr16 (89905944-89905772)
               


               
               352-454, gnl|bosTau2|chr1 (3866790-3866891)
               

               
               352-454, gnl|Hg17|chr21 (31489493-31489392)
               

               
               352-454, gnl|Mm7|chr16 (89893262-89893159)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-247, gnl|bosTau2|chr1 (3840867-3841039)
               

               
               75-247, gnl|Hg17|chr21 (31504404-31504232)
               

               
               75-247, gnl|Mm7|chr16 (89905944-89905772)
               


               
               352-454, gnl|bosTau2|chr1 (3866790-3866891)
               

               
               352-454, gnl|Hg17|chr21 (31489493-31489392)
               

               
               352-454, gnl|Mm7|chr16 (89893262-89893159)

	75-247, gnl\|bosTau2\|chr1 (3840867-3841039)
	75-247, gnl\|Hg17\|chr21 (31504404-31504232)
	75-247, gnl\|Mm7\|chr16 (89905944-89905772)

	352-454, gnl\|bosTau2\|chr1 (3866790-3866891)
	352-454, gnl\|Hg17\|chr21 (31489493-31489392)
	352-454, gnl\|Mm7\|chr16 (89893262-89893159)