Non-Coding RNA Search

Pig1-129N15

Sequence:


               
               AACCACCCCCAGCACGACCCCCAGCCAGAGCAGAGCCTTCCAAACTGTCTGAGTTAGAGT
GGACCTGACACCCATCCTTTCCCGGGAGTCAGGATCTTAGGACTCTTCTAGTCATTAAAG
CTCAGTCACCAGCCACACAACCCCCTTGAACCAAATGAGTGGTCATTTAAGTAGCATCGA
CCACTGTATGGAACAGACTCACAGGAACACCTTCCTTATGACACCAAAAAGGAAAAGGAT
GTAAGCTGATCATCTCCAAAAAGGCATCTCACTGTGCCTTCAGACCAGACTCGGGGGAAG
GTAGGGGCCCAAAGCTGTGTATTTGGGAACCAGGACCTATGGTGAGAACAGTTGGGGAAA
GGGGAAGTGAACACAATTAGAACTTCTCACTTGGGATGTTTTGTATCAACACTTTAAATT
CATCATTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCACCCCCAGCACGACCCCCAGCCAGAGCAGAGCCTTCCAAACTGTCTGAGTTAGAGT
GGACCTGACACCCATCCTTTCCCGGGAGTCAGGATCTTAGGACTCTTCTAGTCATTAAAG
CTCAGTCACCAGCCACACAACCCCCTTGAACCAAATGAGTGGTCATTTAAGTAGCATCGA
CCACTGTATGGAACAGACTCACAGGAACACCTTCCTTATGACACCAAAAAGGAAAAGGAT
GTAAGCTGATCATCTCCAAAAAGGCATCTCACTGTGCCTTCAGACCAGACTCGGGGGAAG
GTAGGGGCCCAAAGCTGTGTATTTGGGAACCAGGACCTATGGTGAGAACAGTTGGGGAAA
GGGGAAGTGAACACAATTAGAACTTCTCACTTGGGATGTTTTGTATCAACACTTTAAATT
CATCATTGT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               1-429, gnl|bosTau2|chr15 (23825872-23825451)
               

               
               1-429, gnl|canFam2|chr5 (14292120-14291683)
               

               
               1-429, gnl|hg17|chr11 (122448963-122449386)
               

               
               1-429, gnl|Hg17|chr11 (122449443-122449027)
               

               
               1-429, gnl|mm7|chr9 (40713415-40713017)
               

               
               1-429, gnl|Mm7|chr9 (40712958-40713346)
               

               
               1-429, gnl|monDom2|scaffold_2 (113645330-113644928)
               

               
               1-429, gnl|oryCun1|scaffold_205453 (171739-172161)
               

               
               1-429, gnl|panTro1|chr9 (124489980-124490405)
               

               
               1-429, gnl|rheMac2|chr14 (121425271-121425702)
               

               
               1-429, gnl|rn3|chr8 (43775953-43775563)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-429, gnl|bosTau2|chr15 (23825872-23825451)
               

               
               1-429, gnl|canFam2|chr5 (14292120-14291683)
               

               
               1-429, gnl|hg17|chr11 (122448963-122449386)
               

               
               1-429, gnl|Hg17|chr11 (122449443-122449027)
               

               
               1-429, gnl|mm7|chr9 (40713415-40713017)
               

               
               1-429, gnl|Mm7|chr9 (40712958-40713346)
               

               
               1-429, gnl|monDom2|scaffold_2 (113645330-113644928)
               

               
               1-429, gnl|oryCun1|scaffold_205453 (171739-172161)
               

               
               1-429, gnl|panTro1|chr9 (124489980-124490405)
               

               
               1-429, gnl|rheMac2|chr14 (121425271-121425702)
               

               
               1-429, gnl|rn3|chr8 (43775953-43775563)

	1-429, gnl\|bosTau2\|chr15 (23825872-23825451)
	1-429, gnl\|canFam2\|chr5 (14292120-14291683)
	1-429, gnl\|hg17\|chr11 (122448963-122449386)
	1-429, gnl\|Hg17\|chr11 (122449443-122449027)
	1-429, gnl\|mm7\|chr9 (40713415-40713017)
	1-429, gnl\|Mm7\|chr9 (40712958-40713346)
	1-429, gnl\|monDom2\|scaffold_2 (113645330-113644928)
	1-429, gnl\|oryCun1\|scaffold_205453 (171739-172161)
	1-429, gnl\|panTro1\|chr9 (124489980-124490405)
	1-429, gnl\|rheMac2\|chr14 (121425271-121425702)
	1-429, gnl\|rn3\|chr8 (43775953-43775563)