Pig1-130L09
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCAGAGCCTGGTGTCCCTCCTGGATGTGGAGCATCTGGGAGGACCTGCAGCCCTTCAGA CACTTGCCCAGCACTTGTCACAACTGCTTTTTTCTCAACCAGATTTTGCTAAGCATGTTG ACTTCTTAGAAGCCATAAGTAGTGCCTTGAGGGCCCTTTTGCAAACAATGGCCTCCCAGA ACATTCCTCAGTGCATGACTCCTGACCAGCTGATGACGCTCTGCACCGCGGGCATCCAGA GCAGCAATGTCGGGGTTCGAGTAAACATGGTCAGTATTTTGGGAATCACCGGCAGCGTCC TCGCCAAAGAAGATGGCACACTGGACACTCTGAAGACCATCGGGTGCTTTCTGCTGGAGG TTGCCACCAAGGATCCCTCCCTCGTCGTAGCAGGAGAGGCTTTGGATGCCCTCTTTGATG TCTTTGCAGATGGTAAAGAAGCTGAAAGGGCCTCCGTTCAAATTAGATTGTTAGCTGCTC TGAAAGACTTCCAGCCGGTCTTCAAAATGAAGATACGGAAAGAAGGGAGAGCTAAATACA GTCCAGATCAGCTCTGTGTTCTTGACAACGTGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCAGAGCCTGGTGTCCCTCCTGGATGTGGAGCATCTGGGAGGACCTGCAGCCCTTCAGA CACTTGCCCAGCACTTGTCACAACTGCTTTTTTCTCAACCAGATTTTGCTAAGCATGTTG ACTTCTTAGAAGCCATAAGTAGTGCCTTGAGGGCCCTTTTGCAAACAATGGCCTCCCAGA ACATTCCTCAGTGCATGACTCCTGACCAGCTGATGACGCTCTGCACCGCGGGCATCCAGA GCAGCAATGTCGGGGTTCGAGTAAACATGGTCAGTATTTTGGGAATCACCGGCAGCGTCC TCGCCAAAGAAGATGGCACACTGGACACTCTGAAGACCATCGGGTGCTTTCTGCTGGAGG TTGCCACCAAGGATCCCTCCCTCGTCGTAGCAGGAGAGGCTTTGGATGCCCTCTTTGATG TCTTTGCAGATGGTAAAGAAGCTGAAAGGGCCTCCGTTCAAATTAGATTGTTAGCTGCTC TGAAAGACTTCCAGCCGGTCTTCAAAATGAAGATACGGAAAGAAGGGAGAGCTAAATACA GTCCAGATCAGCTCTGTGTTCTTGACAACGTGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 1-102, - strand, RNAz p=0.519393 | |
| 7-102, - strand, RNAz p=0.900806 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-102, - strand, RNAz p=0.519393 | |
| 7-102, - strand, RNAz p=0.900806 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 1-102, gnl|bosTau2|chr18 (20174912-20175013) | |
| 1-102, gnl|canFam2|chr2 (68084150-68083970) | |
| 1-102, gnl|danRer3|chr7 (28084134-28083962) | |
| 1-102, gnl|dasNov1|scaffold_26214 (7592-7405) | |
| 1-102, gnl|echTel1|scaffold_300651 (17543-17729) | |
| 1-102, gnl|fr1|chrUn (300928378-300928208) | |
| 1-102, gnl|galGal2|chr11 (6778471-6778310) | |
| 1-102, gnl|hg17|chr16 (48677603-48677786) | |
| 1-102, gnl|Hg17|chr16 (48677662-48677763) | |
| 1-102, gnl|loxAfr1|scaffold_4806 (105619-105432) | |
| 1-102, gnl|mm7|chr8 (86750405-86750590) | |
| 1-102, gnl|Mm7|chr8 (86750463-86750564) | |
| 1-102, gnl|monDom2|scaffold_35 (14830858-14831045) | |
| 1-102, gnl|oryCun1|scaffold_136509 (929-750) | |
| 1-102, gnl|panTro1|chrUn_random (12493795-12493978) | |
| 1-102, gnl|rheMac2|chr20 (48297043-48297230) | |
| 1-102, gnl|rn3|chr19 (20223778-20223604) | |
| 1-102, gnl|xenTro1|scaffold_1603 (9771-9621) | |
| 329-520, gnl|bosTau2|chr18 (20189553-20189744) | |
| 329-520, gnl|Hg17|chr16 (48693664-48693855) | |
| 329-520, gnl|Mm7|chr8 (86759288-86759479) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-102, gnl|bosTau2|chr18 (20174912-20175013) | |
| 1-102, gnl|canFam2|chr2 (68084150-68083970) | |
| 1-102, gnl|danRer3|chr7 (28084134-28083962) | |
| 1-102, gnl|dasNov1|scaffold_26214 (7592-7405) | |
| 1-102, gnl|echTel1|scaffold_300651 (17543-17729) | |
| 1-102, gnl|fr1|chrUn (300928378-300928208) | |
| 1-102, gnl|galGal2|chr11 (6778471-6778310) | |
| 1-102, gnl|hg17|chr16 (48677603-48677786) | |
| 1-102, gnl|Hg17|chr16 (48677662-48677763) | |
| 1-102, gnl|loxAfr1|scaffold_4806 (105619-105432) | |
| 1-102, gnl|mm7|chr8 (86750405-86750590) | |
| 1-102, gnl|Mm7|chr8 (86750463-86750564) | |
| 1-102, gnl|monDom2|scaffold_35 (14830858-14831045) | |
| 1-102, gnl|oryCun1|scaffold_136509 (929-750) | |
| 1-102, gnl|panTro1|chrUn_random (12493795-12493978) | |
| 1-102, gnl|rheMac2|chr20 (48297043-48297230) | |
| 1-102, gnl|rn3|chr19 (20223778-20223604) | |
| 1-102, gnl|xenTro1|scaffold_1603 (9771-9621) | |
| 329-520, gnl|bosTau2|chr18 (20189553-20189744) | |
| 329-520, gnl|Hg17|chr16 (48693664-48693855) | |
| 329-520, gnl|Mm7|chr8 (86759288-86759479) |