Non-Coding RNA Search

Pig1-130P12

Sequence:


               
               gtttccatgtcctggctattgtgaatagtgctgcaatgaacatgtgggggtgcaagtgtc
tcttttaagtagagttttgtccggatatatgcccaagagtgggattgcggggtcatatgg
aagttctatgtatagatttctaaggtatctccaaactgttctccatagtTAGCCAGGGGA
TTTCTACGTGCCATGGGTGCAGCCCTAAACAGACAAAATGACAAAAAAACAAAACAAACA
AACCAAAAAAGCCCTCCAGGTGGAAGAATGTGTAGATGGTGAGAATTCTGACTAAAGCCA
AAGGGGATGTCCTAAAATAAAGGCATATCCCCTTCAGCCTGGGAGGCTGGAAAGAACCTC
CATATGCCGTGGGGATGAAAAAAACAACAACAAAAGACAAGCAAAGTAataaatggagtc
atacagtgcattctcttttgggtctggctttcttcattcagtgttatgtttctgagattc
atccaggtcattgtggttagcagtggtttactcattctcattTCAGGCATACCTTATTGT
GTTGTGCTTTTCTTTATTGCATTTTGCAGATACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               gtttccatgtcctggctattgtgaatagtgctgcaatgaacatgtgggggtgcaagtgtc
tcttttaagtagagttttgtccggatatatgcccaagagtgggattgcggggtcatatgg
aagttctatgtatagatttctaaggtatctccaaactgttctccatagtTAGCCAGGGGA
TTTCTACGTGCCATGGGTGCAGCCCTAAACAGACAAAATGACAAAAAAACAAAACAAACA
AACCAAAAAAGCCCTCCAGGTGGAAGAATGTGTAGATGGTGAGAATTCTGACTAAAGCCA
AAGGGGATGTCCTAAAATAAAGGCATATCCCCTTCAGCCTGGGAGGCTGGAAAGAACCTC
CATATGCCGTGGGGATGAAAAAAACAACAACAAAAGACAAGCAAAGTAataaatggagtc
atacagtgcattctcttttgggtctggctttcttcattcagtgttatgtttctgagattc
atccaggtcattgtggttagcagtggtttactcattctcattTCAGGCATACCTTATTGT
GTTGTGCTTTTCTTTATTGCATTTTGCAGATACTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               449-568, + strand, RNAz p=0.683043

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               449-568, + strand, RNAz p=0.683043

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               3-175, gnl|bosTau2|chr3 (15089596-15089428)
               


               
               410-571, gnl|bosTau2|chr7 (51812137-51812292)
               

               
               410-571, gnl|Hg17|chr9 (92326184-92326311)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-175, gnl|bosTau2|chr3 (15089596-15089428)
               


               
               410-571, gnl|bosTau2|chr7 (51812137-51812292)
               

               
               410-571, gnl|Hg17|chr9 (92326184-92326311)

	3-175, gnl\|bosTau2\|chr3 (15089596-15089428)

	410-571, gnl\|bosTau2\|chr7 (51812137-51812292)
	410-571, gnl\|Hg17\|chr9 (92326184-92326311)